Non-Coding RNA Search

Ss1.1-rpfco0134_p15.5

Sequence:


               
               TCAGATTAAAATGACTTTCTGTCAGTTGTTTCGCATTAAAAATATGGCATTCCTAAGATA
AAATTGTATATTTTTTCCATCTCTTAAATATACATTTTCTTTAATGTATTTTTTTCAATC
TCATAAAAAAGGGATAGTGCATCTTTTAAAATACATTTTATTTGGGGAGGAACATGTGGC
TGAGCAGACTTTTGTATAATATTTCTTCAAAGATATGTAATCACAGACAAAAAAAAAACC
TATTTTTTATAATGTCATTTGAGAGAGCTTCATCAGTATAGTTGGTGGACGTTAATTGTT
TGAATTTGATAGTCTTTGAACTTAATCAAGAAACTACCTGGAACCAGTGAAAAGGAAAGC
TGGACTTAAATAATCTTAGAACTAATTGATAAATGTCTCTTTTAAAATCTACTGTATTTA
TTATAATTTACACCCTTGAAGGTGATCTCTTGTTTTGTGTTGTAAATATATTGTTTGTAT
GTTTCTCTTCTTGCCTTCTGTTATAAGTCTCTTCCTTTCTCAAATAAAGTTTTTTTTAAA
AGAAAAAAAATATAAAAAAAATAAAACTCCACGCGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCAGATTAAAATGACTTTCTGTCAGTTGTTTCGCATTAAAAATATGGCATTCCTAAGATA
AAATTGTATATTTTTTCCATCTCTTAAATATACATTTTCTTTAATGTATTTTTTTCAATC
TCATAAAAAAGGGATAGTGCATCTTTTAAAATACATTTTATTTGGGGAGGAACATGTGGC
TGAGCAGACTTTTGTATAATATTTCTTCAAAGATATGTAATCACAGACAAAAAAAAAACC
TATTTTTTATAATGTCATTTGAGAGAGCTTCATCAGTATAGTTGGTGGACGTTAATTGTT
TGAATTTGATAGTCTTTGAACTTAATCAAGAAACTACCTGGAACCAGTGAAAAGGAAAGC
TGGACTTAAATAATCTTAGAACTAATTGATAAATGTCTCTTTTAAAATCTACTGTATTTA
TTATAATTTACACCCTTGAAGGTGATCTCTTGTTTTGTGTTGTAAATATATTGTTTGTAT
GTTTCTCTTCTTGCCTTCTGTTATAAGTCTCTTCCTTTCTCAAATAAAGTTTTTTTTAAA
AGAAAAAAAATATAAAAAAAATAAAACTCCACGCGG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-543, gnl|bosTau2|chr4 (8878051-8877511)
               

               
               1-543, gnl|Hg17|chr7 (18481168-18481706)
               

               
               1-543, gnl|Mm7|chr12 (32215109-32214570)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-543, gnl|bosTau2|chr4 (8878051-8877511)
               

               
               1-543, gnl|Hg17|chr7 (18481168-18481706)
               

               
               1-543, gnl|Mm7|chr12 (32215109-32214570)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               fco (0.314416)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fco (0.314416)

	1-543, gnl\|bosTau2\|chr4 (8878051-8877511)
	1-543, gnl\|Hg17\|chr7 (18481168-18481706)
	1-543, gnl\|Mm7\|chr12 (32215109-32214570)