Ss1.1-rpfco0137_a21.5
|
AAAAAAAAATGCATAAGGCTTCTAGGATGTAAAATATACATGAAACCCAAGAAGCTGGTG
TTATCCAGATAGGCCTTCTTGTGAAACGTTTTCACCCACGGATATAATTCCTTGGTCAGC
GATTTTATTGTTTACATTCTGAGACTGTGCAGTGTTTTTTTTTTTTTTTGGACTCCTGGC
ACTTGCCTTAAGGATGTTTAGCAAGCTGTTTCCAGGATCAGAAACCACAGAGAAGTATCT
CTGAGCTTTTTCATTGAAGGGTGGATTGTTTTCACTCGAAGCCTGAAATGCCTCTTTAGC
AAAAGCCTGTGGTATAGGGAAAAGCCATGTGAGGAGAGAAGAGCCTAGATCCCATATAAA
AACAAGTGGAAAATTTGTGACTTCCCTCTTGGTCCTTCCAGCCAACCCTCTCCAGGACAA
ACTCATCCCAGCATGGTTTTGATGCAGCCGTCAGTGTTGTTATTTCTGTTAAGTCTACTG
TGAGTGGAAGGGTTAATTTTAGTAGCTGAAGGATGTCTAGTTGTTTGC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AAAAAAAAATGCATAAGGCTTCTAGGATGTAAAATATACATGAAACCCAAGAAGCTGGTG
TTATCCAGATAGGCCTTCTTGTGAAACGTTTTCACCCACGGATATAATTCCTTGGTCAGC
GATTTTATTGTTTACATTCTGAGACTGTGCAGTGTTTTTTTTTTTTTTTGGACTCCTGGC
ACTTGCCTTAAGGATGTTTAGCAAGCTGTTTCCAGGATCAGAAACCACAGAGAAGTATCT
CTGAGCTTTTTCATTGAAGGGTGGATTGTTTTCACTCGAAGCCTGAAATGCCTCTTTAGC
AAAAGCCTGTGGTATAGGGAAAAGCCATGTGAGGAGAGAAGAGCCTAGATCCCATATAAA
AACAAGTGGAAAATTTGTGACTTCCCTCTTGGTCCTTCCAGCCAACCCTCTCCAGGACAA
ACTCATCCCAGCATGGTTTTGATGCAGCCGTCAGTGTTGTTATTTCTGTTAAGTCTACTG
TGAGTGGAAGGGTTAATTTTAGTAGCTGAAGGATGTCTAGTTGTTTGC
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
160-528, gnl|bosTau2|chr3 (38031554-38031928) |
|
160-528, gnl|canFam2|chr6 (52302470-52303011) |
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160-528, gnl|dasNov1|scaffold_8192 (4346-3841) |
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160-528, gnl|echTel1|scaffold_294190 (3075-3589) |
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160-528, gnl|Hg17|chr1 (101051239-101050874) |
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160-528, gnl|hg17|chr2 (176533589-176534098) |
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160-528, gnl|loxAfr1|scaffold_258 (14613-14087) |
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160-528, gnl|mm7|chr3 (115802467-115802959) |
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160-528, gnl|Mm7|chr3 (115802704-115803059) |
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160-528, gnl|monDom2|scaffold_0 (18075879-18076418) |
|
160-528, gnl|oryCun1|scaffold_205425 (56160-55623) |
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160-528, gnl|panTro1|chr13 (66169927-66170439) |
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160-528, gnl|rheMac2|chr12 (39471227-39471733) |
|
160-528, gnl|rn3|chr2 (212145737-212146223) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
160-528, gnl|bosTau2|chr3 (38031554-38031928) |
|
160-528, gnl|canFam2|chr6 (52302470-52303011) |
|
160-528, gnl|dasNov1|scaffold_8192 (4346-3841) |
|
160-528, gnl|echTel1|scaffold_294190 (3075-3589) |
|
160-528, gnl|Hg17|chr1 (101051239-101050874) |
|
160-528, gnl|hg17|chr2 (176533589-176534098) |
|
160-528, gnl|loxAfr1|scaffold_258 (14613-14087) |
|
160-528, gnl|mm7|chr3 (115802467-115802959) |
|
160-528, gnl|Mm7|chr3 (115802704-115803059) |
|
160-528, gnl|monDom2|scaffold_0 (18075879-18076418) |
|
160-528, gnl|oryCun1|scaffold_205425 (56160-55623) |
|
160-528, gnl|panTro1|chr13 (66169927-66170439) |
|
160-528, gnl|rheMac2|chr12 (39471227-39471733) |
|
160-528, gnl|rn3|chr2 (212145737-212146223) |
|
fbs (0.175346) |
|
fco (0.157208) |
|
ova (0.129132) |
|
ebs (0.118301) |
|
fbs (0.175346) |
|
fco (0.157208) |
|
ova (0.129132) |
|
ebs (0.118301) |
