Non-Coding RNA Search

Ss1.1-rpfco0139_p3.5

Sequence:


               
               CATCTGTAAATGTTTCAGTATGTATCTCTAAAAGATATTTATTACCATTATTGCACCTAA
AACTTAATAATTCCTCAATACGACAAAATACAGTTGTTCAATTTTCTGATAAACTTTTTT
TTTTTTTTTAAGTTTGGTATCAAGGTTATACTGGCCTCTTAAAAGCAGTTAGGAAGTGTT
GCCTCCTCCTTTGTTTTCTGAAAGCATTTGTGTAAAATTGGTATTATTATTCAGTGTTTG
CTAGAATTCATCAGTGAAATAATCTGCGCCTGGAGTTTTCTTTATGGAGGAGGTTTTGAC
ATATAGAGCTATTCCAACTTTTAATTTCATTTTTGGTTAGTTTTGGTAAGTTGTGTTTTT
CAAGGAATTTGTCTCAACTAAGTTGTTGAATTTATTGGCATCAAGTTGTTCATAACACTG
CCTTGTTATTCTTTTAAAAACTATTCATTGTAAAATAAAGCACAAGTGTGGAAAACACAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CATCTGTAAATGTTTCAGTATGTATCTCTAAAAGATATTTATTACCATTATTGCACCTAA
AACTTAATAATTCCTCAATACGACAAAATACAGTTGTTCAATTTTCTGATAAACTTTTTT
TTTTTTTTTAAGTTTGGTATCAAGGTTATACTGGCCTCTTAAAAGCAGTTAGGAAGTGTT
GCCTCCTCCTTTGTTTTCTGAAAGCATTTGTGTAAAATTGGTATTATTATTCAGTGTTTG
CTAGAATTCATCAGTGAAATAATCTGCGCCTGGAGTTTTCTTTATGGAGGAGGTTTTGAC
ATATAGAGCTATTCCAACTTTTAATTTCATTTTTGGTTAGTTTTGGTAAGTTGTGTTTTT
CAAGGAATTTGTCTCAACTAAGTTGTTGAATTTATTGGCATCAAGTTGTTCATAACACTG
CCTTGTTATTCTTTTAAAAACTATTCATTGTAAAATAAAGCACAAGTGTGGAAAACACAC

Aligned organism(s): 1 entry(ies)

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Aligned organism(s): 1 entry(ies)

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               9-480, gnl|bosTau2|chr3 (67518524-67519019)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               9-480, gnl|bosTau2|chr3 (67518524-67519019)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

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               fco (0.314416)
               

               
               nco (0.161734)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fco (0.314416)
               

               
               nco (0.161734)