Non-Coding RNA Search

Ss1.1-rpfco0140_f23.5

Sequence:


               
               CGGCTCGAGGATTTAAATGCTTTCCCCTTCCCTTAGTGTAACTGGTCAGTGGAATCAGAA
TCTTGATGTTGTTAACTTTAGATGCTATCTTAGATCTTTGCATACCAATGTGAACATTTA
CACCATTCCTTGTAAAAGTTGTGAAGTGTCTGGTCCTTAAAACTTAGAAAAATTGCCTCT
GTGGTATTCTAAAGAAGTAAGTTGCATTCATAGATGGGTTAAGGCATGCTATATAATAAC
CGATCTATCTCCATTATATTAAAGTGTATGAGCCCAATTTTAAGGGTTTTTTAAAATATA
TATACATATATATGTGTGTGTGTGCTGAAACAAGTTAGTTTGTTTTTATTAAGCAATTTC
TTTTTTATCAGTGTGCCTGTTGTAAGATAAGACTTATCCCAAGAGAAAATTTACAGAATT
CCAATTTAAGATAAGTAAAATGTAGAACATAACTTTTGGAACAAGGGTCAAGTCATGTGA
GTAAATTGCAAAACATTAGTTAGCCTTTAAATTTAAAGAATTTTTATTGGCTCAGTATCC
CAAGCCCTGAACATAATACAGTATATCATATAAATCTGACTTTCATAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGGCTCGAGGATTTAAATGCTTTCCCCTTCCCTTAGTGTAACTGGTCAGTGGAATCAGAA
TCTTGATGTTGTTAACTTTAGATGCTATCTTAGATCTTTGCATACCAATGTGAACATTTA
CACCATTCCTTGTAAAAGTTGTGAAGTGTCTGGTCCTTAAAACTTAGAAAAATTGCCTCT
GTGGTATTCTAAAGAAGTAAGTTGCATTCATAGATGGGTTAAGGCATGCTATATAATAAC
CGATCTATCTCCATTATATTAAAGTGTATGAGCCCAATTTTAAGGGTTTTTTAAAATATA
TATACATATATATGTGTGTGTGTGCTGAAACAAGTTAGTTTGTTTTTATTAAGCAATTTC
TTTTTTATCAGTGTGCCTGTTGTAAGATAAGACTTATCCCAAGAGAAAATTTACAGAATT
CCAATTTAAGATAAGTAAAATGTAGAACATAACTTTTGGAACAAGGGTCAAGTCATGTGA
GTAAATTGCAAAACATTAGTTAGCCTTTAAATTTAAAGAATTTTTATTGGCTCAGTATCC
CAAGCCCTGAACATAATACAGTATATCATATAAATCTGACTTTCATAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               8-479, gnl|bosTau2|chr3 (50487142-50486692)
               

               
               8-479, gnl|Hg17|chr1 (70407314-70407757)
               

               
               8-479, gnl|Mm7|chr3 (157933864-157933427)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               8-479, gnl|bosTau2|chr3 (50487142-50486692)
               

               
               8-479, gnl|Hg17|chr1 (70407314-70407757)
               

               
               8-479, gnl|Mm7|chr3 (157933864-157933427)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               fco (0.157208)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fco (0.157208)

	8-479, gnl\|bosTau2\|chr3 (50487142-50486692)
	8-479, gnl\|Hg17\|chr1 (70407314-70407757)
	8-479, gnl\|Mm7\|chr3 (157933864-157933427)