Ss1.1-rpgl01_a24.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGTGGCCGCAGTGGCAGCACAGATGCAGCACGTGGCGGCCTTCAGCCTGGTAGCCGCGCC GCTGTTGCCCGCGGCAGCCAACTCCCCGCCGGGCGGCGGCCCTGGCACGCTTCCGGGTCT CCCGGCGCCCATCGGGGTCAATGGATTCGGCCCCCTGACCCCCCAAACCAACGGGCAACC TGGCTCCGACAGTCTCTATAATAACGGGCTCTCTCCTTACCCAGCAGCCTATCCGTCGGC CTATGCCCCAGTGAGCACAACTTTTTCCCAGCAGCCTTCAGCCCTGCCTCAGCAGCAAAG AGAAGGCCCCGAAGGCTGTAACCTCTTCATCTATCACCTGCCTCAGGAGTTTGGTGATGC AGAACTCATCCAGACATTCCTGCCCTTTGGAGCCGTTGTCTCTGCCAAAGTCTTTGTGGA TCGAGCCACCAACCAGAGCAAGTGTTTTGGGTTTGTTAGCTTTGACAATCCAACCAGTGC CCAGACAGCTATTCAGGCCATGAATGGCTTTCAAATTGGCATGAAGAGGCTCAAGGTCCA GTTAAAGAGGCCCAAGGATGCCAACCGGCCTTACTGATTTGCTCTCACTGACCAGCCACA GAAAGTGGAAACTGAAGAGTGAGAAGAAAGGAAAAGCACAGCACAGATATTGCTTGAGCA GCCCTTCCTGAAGGAGCAGCCGCAGACGGAGGTGGAACGGACCCAAGGCCGGCACCTGGG CTCAGGCCACTTTAAGGATTGTTTTTACCAAGTGGGTTGTTCTGTGCCTGTGGCGTAGAG CTCAGGCTGGCAAAGCAGCAGGGGCTGGCTAAGGACTGACTGTCTAGGGGAACCAGCAGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGTGGCCGCAGTGGCAGCACAGATGCAGCACGTGGCGGCCTTCAGCCTGGTAGCCGCGCC GCTGTTGCCCGCGGCAGCCAACTCCCCGCCGGGCGGCGGCCCTGGCACGCTTCCGGGTCT CCCGGCGCCCATCGGGGTCAATGGATTCGGCCCCCTGACCCCCCAAACCAACGGGCAACC TGGCTCCGACAGTCTCTATAATAACGGGCTCTCTCCTTACCCAGCAGCCTATCCGTCGGC CTATGCCCCAGTGAGCACAACTTTTTCCCAGCAGCCTTCAGCCCTGCCTCAGCAGCAAAG AGAAGGCCCCGAAGGCTGTAACCTCTTCATCTATCACCTGCCTCAGGAGTTTGGTGATGC AGAACTCATCCAGACATTCCTGCCCTTTGGAGCCGTTGTCTCTGCCAAAGTCTTTGTGGA TCGAGCCACCAACCAGAGCAAGTGTTTTGGGTTTGTTAGCTTTGACAATCCAACCAGTGC CCAGACAGCTATTCAGGCCATGAATGGCTTTCAAATTGGCATGAAGAGGCTCAAGGTCCA GTTAAAGAGGCCCAAGGATGCCAACCGGCCTTACTGATTTGCTCTCACTGACCAGCCACA GAAAGTGGAAACTGAAGAGTGAGAAGAAAGGAAAAGCACAGCACAGATATTGCTTGAGCA GCCCTTCCTGAAGGAGCAGCCGCAGACGGAGGTGGAACGGACCCAAGGCCGGCACCTGGG CTCAGGCCACTTTAAGGATTGTTTTTACCAAGTGGGTTGTTCTGTGCCTGTGGCGTAGAG CTCAGGCTGGCAAAGCAGCAGGGGCTGGCTAAGGACTGACTGTCTAGGGGAACCAGCAGA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 67-224, gnl|bosTau2|chr10 (10680869-10680712) | |
| 67-224, gnl|Hg17|chr15 (70368690-70368533) | |
| 67-224, gnl|Mm7|chr9 (59630367-59630524) | |
| 304-450, gnl|bosTau2|chr10 (10680024-10679878) | |
| 304-450, gnl|canFam2|chr30 (38785106-38785262) | |
| 304-450, gnl|danRer3|chr4 (26634549-26634396) | |
| 304-450, gnl|dasNov1|scaffold_776 (114637-114793) | |
| 304-450, gnl|echTel1|scaffold_313239 (39842-39998) | |
| 304-450, gnl|fr1|chrUn (114792572-114792731) | |
| 304-450, gnl|galGal2|chr10 (1065345-1065176) | |
| 304-450, gnl|hg17|chr15 (70367693-70367852) | |
| 304-450, gnl|Hg17|chr15 (70367848-70367702) | |
| 304-450, gnl|loxAfr1|scaffold_5520 (100654-100810) | |
| 304-450, gnl|mm7|chr9 (59631379-59631223) | |
| 304-450, gnl|Mm7|chr9 (59631225-59631371) | |
| 304-450, gnl|monDom2|scaffold_14 (16926431-16926280) | |
| 304-450, gnl|oryCun1|scaffold_136968 (4193-4039) | |
| 304-450, gnl|panTro1|chr16 (71008110-71008269) | |
| 304-450, gnl|rheMac2|chr7 (50936901-50937060) | |
| 304-450, gnl|rn3|chr8 (63450592-63450436) | |
| 304-450, gnl|tetNig1|chr8 (8701976-8702129) | |
| 304-450, gnl|xenTro1|scaffold_1834 (68633-68474) | |
| 606-840, gnl|bosTau2|chr10 (10678356-10678124) | |
| 606-840, gnl|Hg17|chr15 (70365740-70365507) | |
| 606-840, gnl|Mm7|chr9 (59632904-59633115) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 67-224, gnl|bosTau2|chr10 (10680869-10680712) | |
| 67-224, gnl|Hg17|chr15 (70368690-70368533) | |
| 67-224, gnl|Mm7|chr9 (59630367-59630524) | |
| 304-450, gnl|bosTau2|chr10 (10680024-10679878) | |
| 304-450, gnl|canFam2|chr30 (38785106-38785262) | |
| 304-450, gnl|danRer3|chr4 (26634549-26634396) | |
| 304-450, gnl|dasNov1|scaffold_776 (114637-114793) | |
| 304-450, gnl|echTel1|scaffold_313239 (39842-39998) | |
| 304-450, gnl|fr1|chrUn (114792572-114792731) | |
| 304-450, gnl|galGal2|chr10 (1065345-1065176) | |
| 304-450, gnl|hg17|chr15 (70367693-70367852) | |
| 304-450, gnl|Hg17|chr15 (70367848-70367702) | |
| 304-450, gnl|loxAfr1|scaffold_5520 (100654-100810) | |
| 304-450, gnl|mm7|chr9 (59631379-59631223) | |
| 304-450, gnl|Mm7|chr9 (59631225-59631371) | |
| 304-450, gnl|monDom2|scaffold_14 (16926431-16926280) | |
| 304-450, gnl|oryCun1|scaffold_136968 (4193-4039) | |
| 304-450, gnl|panTro1|chr16 (71008110-71008269) | |
| 304-450, gnl|rheMac2|chr7 (50936901-50937060) | |
| 304-450, gnl|rn3|chr8 (63450592-63450436) | |
| 304-450, gnl|tetNig1|chr8 (8701976-8702129) | |
| 304-450, gnl|xenTro1|scaffold_1834 (68633-68474) | |
| 606-840, gnl|bosTau2|chr10 (10678356-10678124) | |
| 606-840, gnl|Hg17|chr15 (70365740-70365507) | |
| 606-840, gnl|Mm7|chr9 (59632904-59633115) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pgl (0.236967) |