Non-Coding RNA Search

Ss1.1-rpgl01_g9.5

Sequence:


               
               GTTCTTTGAAGATTCTGAGATCTGATTCTGAGATTCTGAGACCTGGTTTGAGGGGAAGCC
CCTGGCAGCCTACCTGTGTATTTCTGGTGGCTCTCGCTTGATCTTGGCACTCGACTCCAT
TACTTCCTTGGCAACTCGGCCACTATAAGTAGTATAATAAAACAAGCAGCAAGAAATGAG
ACAGTGTTCCAGGACTGGCCTCCTCTCTGAGATCTCATATACTTTGGCTGAATTGGGAAA
TGGCCTCTTTGCCCTGCCCTTTCCCAATGTTTAGGTCACTGAGAAAGGCTTGCTTGCTGG
GGAACAGAGCTCTAAGGTGTCCTGACAGCTTTCTTAGAGGGCTCTCTATTTCTGGAGTCT
TCGGGATCTTCCATTCTCATTAAGGAATCATTCCTCATTGTCCAGCCTGTTCCAAAAATA
TTGCACAGAAAAGGAGGAATCTTTTGACAGACATGAATCACTGTTGTAGTTCTTATTTTG
CTGCCTTTGAAAGGGCAGGAGAAGATACAGATCTTAAGCCCTACAGACAAACAGCTGCAG
GGAAGGAAAGAGCCAAAAGGTTAGGAGATATTGGATGGAAACCTCACACCTTTTTGGAGG
TTCCCAGTGTCTTTGTTCTCAAAGATAAGGATCACTGAGCCACTGTTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTCTTTGAAGATTCTGAGATCTGATTCTGAGATTCTGAGACCTGGTTTGAGGGGAAGCC
CCTGGCAGCCTACCTGTGTATTTCTGGTGGCTCTCGCTTGATCTTGGCACTCGACTCCAT
TACTTCCTTGGCAACTCGGCCACTATAAGTAGTATAATAAAACAAGCAGCAAGAAATGAG
ACAGTGTTCCAGGACTGGCCTCCTCTCTGAGATCTCATATACTTTGGCTGAATTGGGAAA
TGGCCTCTTTGCCCTGCCCTTTCCCAATGTTTAGGTCACTGAGAAAGGCTTGCTTGCTGG
GGAACAGAGCTCTAAGGTGTCCTGACAGCTTTCTTAGAGGGCTCTCTATTTCTGGAGTCT
TCGGGATCTTCCATTCTCATTAAGGAATCATTCCTCATTGTCCAGCCTGTTCCAAAAATA
TTGCACAGAAAAGGAGGAATCTTTTGACAGACATGAATCACTGTTGTAGTTCTTATTTTG
CTGCCTTTGAAAGGGCAGGAGAAGATACAGATCTTAAGCCCTACAGACAAACAGCTGCAG
GGAAGGAAAGAGCCAAAAGGTTAGGAGATATTGGATGGAAACCTCACACCTTTTTGGAGG
TTCCCAGTGTCTTTGTTCTCAAAGATAAGGATCACTGAGCCACTGTTC

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               35-237, gnl|bosTau2|chr21 (34610732-34610933)
               


               
               359-646, gnl|bosTau2|chr21 (34610935-34611235)
               

               
               359-646, gnl|Hg17|chr15 (41964503-41965113)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               35-237, gnl|bosTau2|chr21 (34610732-34610933)
               


               
               359-646, gnl|bosTau2|chr21 (34610935-34611235)
               

               
               359-646, gnl|Hg17|chr15 (41964503-41965113)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pgl (0.236967)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pgl (0.236967)

	35-237, gnl\|bosTau2\|chr21 (34610732-34610933)

	359-646, gnl\|bosTau2\|chr21 (34610935-34611235)
	359-646, gnl\|Hg17\|chr15 (41964503-41965113)