Non-Coding RNA Search

Ss1.1-rpgl06_l12.5

Sequence:


               
               GGTTGAAATATTATAGCATATGGGATTATAGAAGAGCTCTTAGCTCACCTGTCAGTTAAA
GGAGCTCTCTTTCTGAACGCTTCCTCACTCAGGTTTGAAATGCCTCCTCTGTAATGTTAC
CTGTGATTGATTGTTAGTGTTGCTTTTTAAGTCTAGGCAGGAATCATCTGGAAAACATTA
TCCTAATTCCTCTTCTCATGTCCTAAGCAGTATATTTTAGTAAGAAATTCTGTATTTGAG
TTCCTGCTGTGGCACAGTGGGTTAAGGATCCGATTGCAGGGGCTTGGGTTGCTGCGGAGG
CACAGGTTTGATCCCTGGCCTGGTGCAGTGGTTTAAAGGATCTGGTGTTGCTGCAGCTGT
GGTTTAGGCTGCAGCTGCATCTTGATTCAATCCAGGAATTTCCATATGCCGCAGGCACAG
CCATAAAACAAGAGAGAAAAGAAAAGTAATTCCATATTAAAAATTTCACTAACATCCCTT
TCTGAGACTATTGTCTCATACATGAATTTGGCTCGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGTTGAAATATTATAGCATATGGGATTATAGAAGAGCTCTTAGCTCACCTGTCAGTTAAA
GGAGCTCTCTTTCTGAACGCTTCCTCACTCAGGTTTGAAATGCCTCCTCTGTAATGTTAC
CTGTGATTGATTGTTAGTGTTGCTTTTTAAGTCTAGGCAGGAATCATCTGGAAAACATTA
TCCTAATTCCTCTTCTCATGTCCTAAGCAGTATATTTTAGTAAGAAATTCTGTATTTGAG
TTCCTGCTGTGGCACAGTGGGTTAAGGATCCGATTGCAGGGGCTTGGGTTGCTGCGGAGG
CACAGGTTTGATCCCTGGCCTGGTGCAGTGGTTTAAAGGATCTGGTGTTGCTGCAGCTGT
GGTTTAGGCTGCAGCTGCATCTTGATTCAATCCAGGAATTTCCATATGCCGCAGGCACAG
CCATAAAACAAGAGAGAAAAGAAAAGTAATTCCATATTAAAAATTTCACTAACATCCCTT
TCTGAGACTATTGTCTCATACATGAATTTGGCTCGA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-229, gnl|bosTau2|chr10 (62073217-62073445)
               

               
               3-229, gnl|Hg17|chr14 (76872200-76871984)
               

               
               3-229, gnl|Mm7|chr12 (85169926-85169712)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-229, gnl|bosTau2|chr10 (62073217-62073445)
               

               
               3-229, gnl|Hg17|chr14 (76872200-76871984)
               

               
               3-229, gnl|Mm7|chr12 (85169926-85169712)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               ill (0.175593)
               

               
               pgl (0.118483)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ill (0.175593)
               

               
               pgl (0.118483)

	3-229, gnl\|bosTau2\|chr10 (62073217-62073445)
	3-229, gnl\|Hg17\|chr14 (76872200-76871984)
	3-229, gnl\|Mm7\|chr12 (85169926-85169712)