Ss1.1-rpgl07_o17.5
|
CTAGGTTCCTTTCCAGCGTCCCTGTCTCCCACTTCGAGAGCGAACCCCGCGGCCGGTAGG
CTGAAGAGGAGCCAGGAAAGAAGGACTAAAGAGAAGAAAGACCTGGCTGGTTCTAGGTGG
TGTCTGCAGTGCCAGTAAGGGAGGTGGCGGCGGGCGCTGCGACCACGGCCGCGCGGGACG
TGAGGCCCAACAGCAGCCGACGTGGCGGCGGTGGCGGCCACTCCAGCGCCTCGCGCCGGG
GCCGTTAGTCAGCAGAACGCCAACCTGTGTAAAGGAACAGGGCCGGCCCGAGGCGAGACT
CGGGAGCGCGAGCCGGCTCCCCCGAGCGCCGCCGTCCTTCCTCGTCCCGGCGCCGGGGGC
TGCAGCCCTTGTCCCCCTCCTCGGCCGGGCCCGCCTGCAGGCCGGGAGAGTCCGGCAGAG
GCAGCAGCAGCAGCAGAGCGGAACGCGCCTTGTAGAGGACAGCGCGGCGGCAGAGGTTCC
TTCTCGGCCCTTTCTGCCTGACGCCTTGGTTGCGGCCCTCAGGTGCAGAAGATGAATAAT
CTTTCATTTAGTGAGCTATGTTGCCTCTTCTGCTGTCCACCATGTCCGGGGAAAATTGCT
TCAAAATTAGCATTTTTGCCACCTGATCCAACTTACACTCTGATGTGTGATGAAAGTGGA
AGCCGCTGGACTTTACACCTGTCAGAACGAGCAGACTGGCAATATTCTTCTAGAGAAAAA
GATGCTATTGAGTGTTTCATGACTAGAACCAGTAAAGGCAACAGAATTGCCTGCATGTTT
GTTCGTTGCTCACCCAATGCCAAATACACTTTACTCTTCTCACATGGAAATGCTGTTGAT
CTTGGTCAGATGAGCAGCTTTTACATAGGACTGGGATCACGGATTAATTGTAATATATTC
TCATATGATTATTCTGGATATGGTGCAAGTTCTGGGAAACCAACAGAGAAGAACCTCTAT
GCAGACATAGAAGCTGCTTGGCTT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CTAGGTTCCTTTCCAGCGTCCCTGTCTCCCACTTCGAGAGCGAACCCCGCGGCCGGTAGG
CTGAAGAGGAGCCAGGAAAGAAGGACTAAAGAGAAGAAAGACCTGGCTGGTTCTAGGTGG
TGTCTGCAGTGCCAGTAAGGGAGGTGGCGGCGGGCGCTGCGACCACGGCCGCGCGGGACG
TGAGGCCCAACAGCAGCCGACGTGGCGGCGGTGGCGGCCACTCCAGCGCCTCGCGCCGGG
GCCGTTAGTCAGCAGAACGCCAACCTGTGTAAAGGAACAGGGCCGGCCCGAGGCGAGACT
CGGGAGCGCGAGCCGGCTCCCCCGAGCGCCGCCGTCCTTCCTCGTCCCGGCGCCGGGGGC
TGCAGCCCTTGTCCCCCTCCTCGGCCGGGCCCGCCTGCAGGCCGGGAGAGTCCGGCAGAG
GCAGCAGCAGCAGCAGAGCGGAACGCGCCTTGTAGAGGACAGCGCGGCGGCAGAGGTTCC
TTCTCGGCCCTTTCTGCCTGACGCCTTGGTTGCGGCCCTCAGGTGCAGAAGATGAATAAT
CTTTCATTTAGTGAGCTATGTTGCCTCTTCTGCTGTCCACCATGTCCGGGGAAAATTGCT
TCAAAATTAGCATTTTTGCCACCTGATCCAACTTACACTCTGATGTGTGATGAAAGTGGA
AGCCGCTGGACTTTACACCTGTCAGAACGAGCAGACTGGCAATATTCTTCTAGAGAAAAA
GATGCTATTGAGTGTTTCATGACTAGAACCAGTAAAGGCAACAGAATTGCCTGCATGTTT
GTTCGTTGCTCACCCAATGCCAAATACACTTTACTCTTCTCACATGGAAATGCTGTTGAT
CTTGGTCAGATGAGCAGCTTTTACATAGGACTGGGATCACGGATTAATTGTAATATATTC
TCATATGATTATTCTGGATATGGTGCAAGTTCTGGGAAACCAACAGAGAAGAACCTCTAT
GCAGACATAGAAGCTGCTTGGCTT
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
21-528, gnl|bosTau2|chr8 (22883230-22882714) |
|
21-528, gnl|canFam2|chr1 (88874515-88874059) |
|
21-528, gnl|hg17|chr9 (71755037-71755477) |
|
21-528, gnl|Hg17|chr9 (71755607-71755104) |
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21-528, gnl|mm7|chr19 (21351745-21351494) |
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21-528, gnl|monDom2|scaffold_17 (17558553-17557965) |
|
21-528, gnl|panTro1|chr11 (55576463-55576903) |
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21-528, gnl|rheMac2|chr15 (80698223-80698672) |
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21-528, gnl|rn3|chr1 (225052158-225051909) |
| |
|
676-982, gnl|bosTau2|chr21 (19477106-19476800) |
|
676-982, gnl|Hg17|chr15 (78775093-78775399) |
|
676-982, gnl|Mm7|chr7 (80073184-80072878) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
21-528, gnl|bosTau2|chr8 (22883230-22882714) |
|
21-528, gnl|canFam2|chr1 (88874515-88874059) |
|
21-528, gnl|hg17|chr9 (71755037-71755477) |
|
21-528, gnl|Hg17|chr9 (71755607-71755104) |
|
21-528, gnl|mm7|chr19 (21351745-21351494) |
|
21-528, gnl|monDom2|scaffold_17 (17558553-17557965) |
|
21-528, gnl|panTro1|chr11 (55576463-55576903) |
|
21-528, gnl|rheMac2|chr15 (80698223-80698672) |
|
21-528, gnl|rn3|chr1 (225052158-225051909) |
| |
|
676-982, gnl|bosTau2|chr21 (19477106-19476800) |
|
676-982, gnl|Hg17|chr15 (78775093-78775399) |
|
676-982, gnl|Mm7|chr7 (80073184-80072878) |
|
cbl (0.573987) |
|
pla (0.133672) |
|
pgl (0.118483) |
|
cbl (0.573987) |
|
pla (0.133672) |
|
pgl (0.118483) |
