Ss1.1-rpgl08_f24.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGGGTCATCAACCCGCCCCCCAAGCGCCGCATCCTGGTTGTGGTCCCCGAGATCTTCCTG CCCATAGAGGACGACTGCGGGGACTTCCTGGTGATGCGGAAAACAGCTTCCCGCGGCTCC GCCACCACGTACGAGACCTGCCAGACCTACGAACGTCCCATCGCCTTCACCTCCAGGTCC AGGAGGCTGTGGATTCAGTTTAAGTCCAACGAAGGGAACAGCGCCAAAGGGTTCCAGGTC CCCTACGTGACCTACGACGAGGACTACCAGGAACTCATTGAAGACATAGTTCGAGACGGC AGGCTCTATGCGTCTGAGAACCATCAGGAGATACTTAAGGATAAGAAACTGATCAAGGCT CTGTTCGACGTCCTGGCCCACCCCCAGAACTACTTCAGGTACACAGCCCAGGAGTCCCGG GAGATGTTTCCGAGATCCTTCATCCGGCTGCTCCGTTCCAAGGTGTCCAGGTTTTTGCGG CCCTACAGATGAGTCTGCCACGTGCCGTGGGCACGGCCTTCGGCCTGTGGGCTGGCAGGA CACGGCCCTCCGCTTCTGCGCCAGCAGAGGGGACACGCTGCCTCTAGTAGCAGCGACCGG TTGGAGTTCAGTTGTTAGAGAGAATACAGATGATTTGGTAAATTGGAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGGGTCATCAACCCGCCCCCCAAGCGCCGCATCCTGGTTGTGGTCCCCGAGATCTTCCTG CCCATAGAGGACGACTGCGGGGACTTCCTGGTGATGCGGAAAACAGCTTCCCGCGGCTCC GCCACCACGTACGAGACCTGCCAGACCTACGAACGTCCCATCGCCTTCACCTCCAGGTCC AGGAGGCTGTGGATTCAGTTTAAGTCCAACGAAGGGAACAGCGCCAAAGGGTTCCAGGTC CCCTACGTGACCTACGACGAGGACTACCAGGAACTCATTGAAGACATAGTTCGAGACGGC AGGCTCTATGCGTCTGAGAACCATCAGGAGATACTTAAGGATAAGAAACTGATCAAGGCT CTGTTCGACGTCCTGGCCCACCCCCAGAACTACTTCAGGTACACAGCCCAGGAGTCCCGG GAGATGTTTCCGAGATCCTTCATCCGGCTGCTCCGTTCCAAGGTGTCCAGGTTTTTGCGG CCCTACAGATGAGTCTGCCACGTGCCGTGGGCACGGCCTTCGGCCTGTGGGCTGGCAGGA CACGGCCCTCCGCTTCTGCGCCAGCAGAGGGGACACGCTGCCTCTAGTAGCAGCGACCGG TTGGAGTTCAGTTGTTAGAGAGAATACAGATGATTTGGTAAATTGGAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 1-101, gnl|bosTau2|chr5 (71861058-71860958) | |
| 1-101, gnl|canFam2|chr10 (25413473-25413298) | |
| 1-101, gnl|danRer3|chrUn (18044472-18044305) | |
| 1-101, gnl|dasNov1|scaffold_77669 (456-644) | |
| 1-101, gnl|echTel1|scaffold_298223 (4626-4796) | |
| 1-101, gnl|fr1|chrUn (70190167-70190333) | |
| 1-101, gnl|galGal2|chr1 (65163655-65163834) | |
| 1-101, gnl|hg17|chr22 (41930517-41930708) | |
| 1-101, gnl|Hg17|chr22 (41930652-41930552) | |
| 1-101, gnl|loxAfr1|scaffold_1466 (51302-51111) | |
| 1-101, gnl|mm7|chr15 (83692448-83692636) | |
| 1-101, gnl|Mm7|chr15 (83692580-83692480) | |
| 1-101, gnl|monDom2|scaffold_119 (2146879-2147051) | |
| 1-101, gnl|oryCun1|scaffold_212589 (127968-128144) | |
| 1-101, gnl|panTro1|chr23_random (13686017-13686208) | |
| 1-101, gnl|rheMac2|chr10 (87187681-87187872) | |
| 1-101, gnl|rn3|chr7 (121670058-121670246) | |
| 1-101, gnl|tetNig1|chrUn_random (48616183-48616346) | |
| 1-101, gnl|xenTro1|scaffold_1162 (124054-124220) | |
| 104-277, gnl|bosTau2|chr15 (30556797-30556623) | |
| 104-277, gnl|Hg17|chr11 (9003980-9003816) | |
| 104-277, gnl|Mm7|chr7 (105720034-105719851) | |
| 335-645, gnl|bosTau2|chr15 (30551830-30551515) | |
| 335-645, gnl|Hg17|chr11 (8999325-8999007) | |
| 335-645, gnl|Mm7|chr7 (105714681-105714365) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-101, gnl|bosTau2|chr5 (71861058-71860958) | |
| 1-101, gnl|canFam2|chr10 (25413473-25413298) | |
| 1-101, gnl|danRer3|chrUn (18044472-18044305) | |
| 1-101, gnl|dasNov1|scaffold_77669 (456-644) | |
| 1-101, gnl|echTel1|scaffold_298223 (4626-4796) | |
| 1-101, gnl|fr1|chrUn (70190167-70190333) | |
| 1-101, gnl|galGal2|chr1 (65163655-65163834) | |
| 1-101, gnl|hg17|chr22 (41930517-41930708) | |
| 1-101, gnl|Hg17|chr22 (41930652-41930552) | |
| 1-101, gnl|loxAfr1|scaffold_1466 (51302-51111) | |
| 1-101, gnl|mm7|chr15 (83692448-83692636) | |
| 1-101, gnl|Mm7|chr15 (83692580-83692480) | |
| 1-101, gnl|monDom2|scaffold_119 (2146879-2147051) | |
| 1-101, gnl|oryCun1|scaffold_212589 (127968-128144) | |
| 1-101, gnl|panTro1|chr23_random (13686017-13686208) | |
| 1-101, gnl|rheMac2|chr10 (87187681-87187872) | |
| 1-101, gnl|rn3|chr7 (121670058-121670246) | |
| 1-101, gnl|tetNig1|chrUn_random (48616183-48616346) | |
| 1-101, gnl|xenTro1|scaffold_1162 (124054-124220) | |
| 104-277, gnl|bosTau2|chr15 (30556797-30556623) | |
| 104-277, gnl|Hg17|chr11 (9003980-9003816) | |
| 104-277, gnl|Mm7|chr7 (105720034-105719851) | |
| 335-645, gnl|bosTau2|chr15 (30551830-30551515) | |
| 335-645, gnl|Hg17|chr11 (8999325-8999007) | |
| 335-645, gnl|Mm7|chr7 (105714681-105714365) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| rec (0.17307) | |
| pty (0.142714) | |
| cov (0.132153) | |
| pgl (0.118483) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| rec (0.17307) | |
| pty (0.142714) | |
| cov (0.132153) | |
| pgl (0.118483) |