Ss1.1-rpgl09_p23.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTGGCTCCGCGTTGCCCCTGCTCCGCGCCGCGCTTCTGCCCGCACCGCGCTTCTGCCCAC CCCGCGGCTCGCGGCGGGGCGGAGTCTGCAAGAGTTTGCCCCGGAGCTCGGGGAAGTTTC CCGCCGCAGCTCCCGCACGAGCAGTACCTGCCGGCGCCCGGCGCCTTCCGCTCCCCTCGC TGCTCGTAAGAACGAGTGCTTCAGAGAAACAGGATGGCAGTGCTGTGGAAAACCAAGCCA GGAGGTCTTCAGAAACGAGGAGAGGTGCAGCCGTCTGATGTGGTCATGAACCCCAAACAG GTCTTCTTCTCAGTGCTGATATTTGGGGCAGCAGGGCTGCTCCTCTTCATGTATTTGCAA GTCTGGATTGAAGAACAACACACAGGATGGGGGCCTATAAATTACTTGCAGCCTATACCC AGAATCATGACTAGAGAAAAAATCCAGGAACGTATCACCAACCAGAACCTCAAATCCCAC GTGCCTAAGGATCCCAAGGATAAAAAGGAAAATCTACTCAACTCCCAGAGGCCTCCTAGG GTCTTAACAGACACCAGTCACTCGCAAGGAGAGGCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTGGCTCCGCGTTGCCCCTGCTCCGCGCCGCGCTTCTGCCCGCACCGCGCTTCTGCCCAC CCCGCGGCTCGCGGCGGGGCGGAGTCTGCAAGAGTTTGCCCCGGAGCTCGGGGAAGTTTC CCGCCGCAGCTCCCGCACGAGCAGTACCTGCCGGCGCCCGGCGCCTTCCGCTCCCCTCGC TGCTCGTAAGAACGAGTGCTTCAGAGAAACAGGATGGCAGTGCTGTGGAAAACCAAGCCA GGAGGTCTTCAGAAACGAGGAGAGGTGCAGCCGTCTGATGTGGTCATGAACCCCAAACAG GTCTTCTTCTCAGTGCTGATATTTGGGGCAGCAGGGCTGCTCCTCTTCATGTATTTGCAA GTCTGGATTGAAGAACAACACACAGGATGGGGGCCTATAAATTACTTGCAGCCTATACCC AGAATCATGACTAGAGAAAAAATCCAGGAACGTATCACCAACCAGAACCTCAAATCCCAC GTGCCTAAGGATCCCAAGGATAAAAAGGAAAATCTACTCAACTCCCAGAGGCCTCCTAGG GTCTTAACAGACACCAGTCACTCGCAAGGAGAGGCT |
| Aligned organism(s): 29 entry(ies) | More info |
| Aligned organism(s): 29 entry(ies) | Help | Less info |
| 190-386, gnl|bosTau2|chr24 (22295245-22295045) | |
| 190-386, gnl|canFam2|chr7 (64647094-64646660) | |
| 190-386, gnl|dasNov1|scaffold_7717 (19826-19378) | |
| 190-386, gnl|echTel1|scaffold_276212 (78615-79058) | |
| 190-386, gnl|hg17|chr18 (22976520-22976974) | |
| 190-386, gnl|Hg17|chr18 (22976856-22976650) | |
| 190-386, gnl|loxAfr1|scaffold_92652 (4080-4537) | |
| 190-386, gnl|mm7|chr18 (16065203-16065633) | |
| 190-386, gnl|Mm7|chr18 (16065527-16065321) | |
| 190-386, gnl|monDom2|scaffold_21 (43478290-43478700) | |
| 190-386, gnl|oryCun1|scaffold_214124 (69108-69514) | |
| 190-386, gnl|panTro1|chr17 (18910969-18911422) | |
| 190-386, gnl|rheMac2|chr18 (20160224-20160671) | |
| 190-386, gnl|rn3|chr18 (6959228-6959659) | |
| 463-576, gnl|bosTau2|chr24 (22058661-22058548) | |
| 463-576, gnl|canFam2|chr7 (64838471-64838242) | |
| 463-576, gnl|dasNov1|scaffold_2489 (58246-58478) | |
| 463-576, gnl|echTel1|scaffold_294807 (53784-53549) | |
| 463-576, gnl|galGal2|chr2 (103653848-103654088) | |
| 463-576, gnl|hg17|chr18 (22751118-22751353) | |
| 463-576, gnl|Hg17|chr18 (22751315-22751199) | |
| 463-576, gnl|loxAfr1|scaffold_236 (160458-160694) | |
| 463-576, gnl|mm7|chr18 (15802348-15802555) | |
| 463-576, gnl|Mm7|chr18 (15802518-15802405) | |
| 463-576, gnl|monDom2|scaffold_21 (43191976-43192208) | |
| 463-576, gnl|oryCun1|scaffold_199278 (40258-40490) | |
| 463-576, gnl|panTro1|chr17 (18682777-18683012) | |
| 463-576, gnl|rheMac2|chr18 (19913056-19913294) | |
| 463-576, gnl|rn3|chr18 (6700005-6700215) |
| Aligned organism(s): 29 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 190-386, gnl|bosTau2|chr24 (22295245-22295045) | |
| 190-386, gnl|canFam2|chr7 (64647094-64646660) | |
| 190-386, gnl|dasNov1|scaffold_7717 (19826-19378) | |
| 190-386, gnl|echTel1|scaffold_276212 (78615-79058) | |
| 190-386, gnl|hg17|chr18 (22976520-22976974) | |
| 190-386, gnl|Hg17|chr18 (22976856-22976650) | |
| 190-386, gnl|loxAfr1|scaffold_92652 (4080-4537) | |
| 190-386, gnl|mm7|chr18 (16065203-16065633) | |
| 190-386, gnl|Mm7|chr18 (16065527-16065321) | |
| 190-386, gnl|monDom2|scaffold_21 (43478290-43478700) | |
| 190-386, gnl|oryCun1|scaffold_214124 (69108-69514) | |
| 190-386, gnl|panTro1|chr17 (18910969-18911422) | |
| 190-386, gnl|rheMac2|chr18 (20160224-20160671) | |
| 190-386, gnl|rn3|chr18 (6959228-6959659) | |
| 463-576, gnl|bosTau2|chr24 (22058661-22058548) | |
| 463-576, gnl|canFam2|chr7 (64838471-64838242) | |
| 463-576, gnl|dasNov1|scaffold_2489 (58246-58478) | |
| 463-576, gnl|echTel1|scaffold_294807 (53784-53549) | |
| 463-576, gnl|galGal2|chr2 (103653848-103654088) | |
| 463-576, gnl|hg17|chr18 (22751118-22751353) | |
| 463-576, gnl|Hg17|chr18 (22751315-22751199) | |
| 463-576, gnl|loxAfr1|scaffold_236 (160458-160694) | |
| 463-576, gnl|mm7|chr18 (15802348-15802555) | |
| 463-576, gnl|Mm7|chr18 (15802518-15802405) | |
| 463-576, gnl|monDom2|scaffold_21 (43191976-43192208) | |
| 463-576, gnl|oryCun1|scaffold_199278 (40258-40490) | |
| 463-576, gnl|panTro1|chr17 (18682777-18683012) | |
| 463-576, gnl|rheMac2|chr18 (19913056-19913294) | |
| 463-576, gnl|rn3|chr18 (6700005-6700215) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pgl (0.118483) |