Ss1.1-rpgl10_h8.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGGGCATCCTGTTTTCACTCGCTCAATCTGGCCACCGTACTCCTGGAGGGTCAAGACCGC TGTCCAGCCTGGGCAGTGGAGCCTGACAAGCTCCCTTTGCCCCCAGGCAGGTGCTGCGGG ACCACAACTGCCTGCAGACACTGCTGCAACACCTGACTTCGCACAGCCTGACCATCGTGA GCAATGCCTGTGGCACACTCTGGAACCTGTCTGCCCGTAGCCCTCGCGACCAGGAGCTAC TGTGGGACCTGGGCGCCGTGGGCATGCTGCGCAACCTGGTACACTCAAAGCACAAGATGA TCGCCATGGGCAGTGCTGCCGCCCTGCGCAACCTGCTGGCCCACCGGCCCGCCAAGTACC AGGCAGCTGCCACTGCCATCTCCCCTGGCGCCTGTGTGCCCAGCCTGTATGTGCGCAAGC AGCGGGCTCTGGAAGCAGAGCTGGATGCGAGGCACCTGGCACAGGCGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGGGCATCCTGTTTTCACTCGCTCAATCTGGCCACCGTACTCCTGGAGGGTCAAGACCGC TGTCCAGCCTGGGCAGTGGAGCCTGACAAGCTCCCTTTGCCCCCAGGCAGGTGCTGCGGG ACCACAACTGCCTGCAGACACTGCTGCAACACCTGACTTCGCACAGCCTGACCATCGTGA GCAATGCCTGTGGCACACTCTGGAACCTGTCTGCCCGTAGCCCTCGCGACCAGGAGCTAC TGTGGGACCTGGGCGCCGTGGGCATGCTGCGCAACCTGGTACACTCAAAGCACAAGATGA TCGCCATGGGCAGTGCTGCCGCCCTGCGCAACCTGCTGGCCCACCGGCCCGCCAAGTACC AGGCAGCTGCCACTGCCATCTCCCCTGGCGCCTGTGTGCCCAGCCTGTATGTGCGCAAGC AGCGGGCTCTGGAAGCAGAGCTGGATGCGAGGCACCTGGCACAGGCGC |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 45-163, - strand, RNAz p=0.942286 | |
| 284-403, - strand, RNAz p=0.542188 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 45-163, - strand, RNAz p=0.942286 | |
| 284-403, - strand, RNAz p=0.542188 |
| Aligned organism(s): 6 entry(ies) | More info |
| Aligned organism(s): 6 entry(ies) | Help | Less info |
| 45-466, gnl|bosTau2|chr7 (29020990-29020568) | |
| 45-466, gnl|Hg17|chr19 (1416100-1416513) | |
| 45-466, gnl|Mm7|chr10 (80093416-80093783) | |
| 104-448, gnl|bosTau2|chr10 (9471109-9471450) | |
| 104-448, gnl|Hg17|chr5 (112201146-112201487) | |
| 104-448, gnl|Mm7|chr18 (34687467-34687808) |
| Aligned organism(s): 6 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 45-466, gnl|bosTau2|chr7 (29020990-29020568) | |
| 45-466, gnl|Hg17|chr19 (1416100-1416513) | |
| 45-466, gnl|Mm7|chr10 (80093416-80093783) | |
| 104-448, gnl|bosTau2|chr10 (9471109-9471450) | |
| 104-448, gnl|Hg17|chr5 (112201146-112201487) | |
| 104-448, gnl|Mm7|chr18 (34687467-34687808) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pgl (0.118483) |