Non-Coding RNA Search

Ss1.1-rpgl12_g13.5

Sequence:


               
               CACAGGCGCCAGCCAGCGCAGACAGCCCCAACCAGCAGCCCAAGCTCCAGATGAGAGTCC
CTGCCGTCAGGTTAAAGACACCCACCAAGCCTCCGTGCCCCTAGCCCCAGGGGCCAGCCG
AGCACTCCGCCATCCTGCTGAGACGGGGTGGATTTTATTTATTGAACCTTGGGGCGCTGT
CACGTGGGACGTGCAGCACCCGGAGCAGCTGTCTCAGCGAGCGCCCCTTCTCTGTGTTAC
ATGACCAATTGAAAAAGTGACATTGGCTGTTTTTCCTAGATTGTTTTACCTTTTAGTTTC
TCCTCCGGAGCAGTAGTGCTGGATGTGAAAGCCACATAGAGTTTCTCTGTCCGTGTACAG
TGTTTTGCACATCACAAGTAGCCGTTTGGAATGTGCAGTGAGTCATAAAATAGACTTAAT
GAAGCTACAACCTGGTCTTTGACA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CACAGGCGCCAGCCAGCGCAGACAGCCCCAACCAGCAGCCCAAGCTCCAGATGAGAGTCC
CTGCCGTCAGGTTAAAGACACCCACCAAGCCTCCGTGCCCCTAGCCCCAGGGGCCAGCCG
AGCACTCCGCCATCCTGCTGAGACGGGGTGGATTTTATTTATTGAACCTTGGGGCGCTGT
CACGTGGGACGTGCAGCACCCGGAGCAGCTGTCTCAGCGAGCGCCCCTTCTCTGTGTTAC
ATGACCAATTGAAAAAGTGACATTGGCTGTTTTTCCTAGATTGTTTTACCTTTTAGTTTC
TCCTCCGGAGCAGTAGTGCTGGATGTGAAAGCCACATAGAGTTTCTCTGTCCGTGTACAG
TGTTTTGCACATCACAAGTAGCCGTTTGGAATGTGCAGTGAGTCATAAAATAGACTTAAT
GAAGCTACAACCTGGTCTTTGACA

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               3-438, gnl|bosTau2|chr17 (23628996-23628545)
               

               
               3-438, gnl|Hg17|chr12 (131228347-131228863)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-438, gnl|bosTau2|chr17 (23628996-23628545)
               

               
               3-438, gnl|Hg17|chr12 (131228347-131228863)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               col (0.195008)
               

               
               lnt (0.142308)
               

               
               eep (0.122564)
               

               
               pgl (0.118483)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               col (0.195008)
               

               
               lnt (0.142308)
               

               
               eep (0.122564)
               

               
               pgl (0.118483)

	3-438, gnl\|bosTau2\|chr17 (23628996-23628545)
	3-438, gnl\|Hg17\|chr12 (131228347-131228863)