Ss1.1-rpgl15_o19.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AAAAAACATCATTGATAAAAAACTGTGATTCTGAAAGTCAGAAGTATCATTGCTTAGTCA TGGTGTTATCCCCCTGTCACATGAAAGAAATAACTATAAAATCTGGACCAAATTCTGGCT CTAAAGTGCCTTTAGCAACAATTGTGGTAATTGACCAGTCAGAAATTAAGAAGAAGGTTT TTCTGTGGAGGACTGCAGCATTTTGGGCACTTACAGTGTTTCTTGGAGATATAATTTTAC TAACAGATGTTACTATTCATGAAGATCATTGGGTTGGTGAGACAGTACTGCAGTCAACAT TTACCAGTCAGTTATTAAATCTTGGGAGTTATTCATCTGTCCGGCCTGAAGAATATTCCG GTGTAGTTAGTGATGTTGTACTTCAAGATTTACTGGCATATGTGTCTTCAAAACACTCCT ATCTCAGAGACCTTCCTCAAAGGCAGCCTCAGAAAATGAGCAGTATAGAATTTGTAGAAT TGGAGCAGCTTCAGCCAGACATATTAGTCCACGCAGTTCTAAGAGTTGTTGATATCACTA TACTGACAGAGGCATTATACAGTTATAGAGGACAGAAGCAAAGGAAAGTTATGTTAACAG TGGAGCAGACCCAAGGTCAACATTATGTGCTTGTATTATGGGGTCCTGGAGCAGCCTGGT ACCCTCAGCTTCAAAGGAAAAAAGATTCTATTTGGGAATTTAAATATC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AAAAAACATCATTGATAAAAAACTGTGATTCTGAAAGTCAGAAGTATCATTGCTTAGTCA TGGTGTTATCCCCCTGTCACATGAAAGAAATAACTATAAAATCTGGACCAAATTCTGGCT CTAAAGTGCCTTTAGCAACAATTGTGGTAATTGACCAGTCAGAAATTAAGAAGAAGGTTT TTCTGTGGAGGACTGCAGCATTTTGGGCACTTACAGTGTTTCTTGGAGATATAATTTTAC TAACAGATGTTACTATTCATGAAGATCATTGGGTTGGTGAGACAGTACTGCAGTCAACAT TTACCAGTCAGTTATTAAATCTTGGGAGTTATTCATCTGTCCGGCCTGAAGAATATTCCG GTGTAGTTAGTGATGTTGTACTTCAAGATTTACTGGCATATGTGTCTTCAAAACACTCCT ATCTCAGAGACCTTCCTCAAAGGCAGCCTCAGAAAATGAGCAGTATAGAATTTGTAGAAT TGGAGCAGCTTCAGCCAGACATATTAGTCCACGCAGTTCTAAGAGTTGTTGATATCACTA TACTGACAGAGGCATTATACAGTTATAGAGGACAGAAGCAAAGGAAAGTTATGTTAACAG TGGAGCAGACCCAAGGTCAACATTATGTGCTTGTATTATGGGGTCCTGGAGCAGCCTGGT ACCCTCAGCTTCAAAGGAAAAAAGATTCTATTTGGGAATTTAAATATC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 1-246, gnl|bosTau2|chr28 (31982787-31983032) | |
| 1-246, gnl|canFam2|chr4 (37901907-37902588) | |
| 1-246, gnl|canFam2|chr4 (37901907-37902671) | |
| 1-246, gnl|dasNov1|scaffold_106441 (1423-2181) | |
| 1-246, gnl|dasNov1|scaffold_62336 (4637-3964) | |
| 1-246, gnl|echTel1|scaffold_250511 (715-54) | |
| 1-246, gnl|echTel1|scaffold_250511 (715-4) | |
| 1-246, gnl|galGal2|chr6 (2161962-2162655) | |
| 1-246, gnl|galGal2|chr6 (2161962-2162738) | |
| 1-246, gnl|hg17|chr10 (46318420-46319182) | |
| 1-246, gnl|Hg17|chr10 (88902371-88902616) | |
| 1-246, gnl|hg17|chr14 (87489355-87490035) | |
| 1-246, gnl|mm7|chr14 (31700835-31700199) | |
| 1-246, gnl|mm7|chr14 (31700835-31700116) | |
| 1-246, gnl|Mm7|chr14 (31700365-31700120) | |
| 1-246, gnl|monDom2|scaffold_14 (21801768-21801114) | |
| 1-246, gnl|monDom2|scaffold_14 (21801768-21801031) | |
| 1-246, gnl|panTro1|chr15_random (19215789-19215109) | |
| 1-246, gnl|panTro1|chr8 (47313897-47314664) | |
| 1-246, gnl|rheMac2|chr9 (49395381-49396062) | |
| 1-246, gnl|rheMac2|chr9 (49395381-49396145) | |
| 1-246, gnl|rn3|chr16 (9904541-9903860) | |
| 1-246, gnl|rn3|chr16 (9904541-9903777) | |
| 1-246, gnl|xenTro1|scaffold_44 (374664-375258) | |
| 1-246, gnl|xenTro1|scaffold_44 (374676-375338) | |
| 355-549, gnl|bosTau2|chr28 (31996360-31996554) | |
| 355-549, gnl|canFam2|chr4 (37915242-37915419) | |
| 355-549, gnl|dasNov1|scaffold_62336 (3777-3600) | |
| 355-549, gnl|hg17|chr10 (46338176-46338353) | |
| 355-549, gnl|Hg17|chr10 (88920215-88920409) | |
| 355-549, gnl|loxAfr1|scaffold_22746 (11681-11858) | |
| 355-549, gnl|mm7|chr14 (31681991-31681814) | |
| 355-549, gnl|Mm7|chr14 (31681990-31681796) | |
| 355-549, gnl|monDom2|scaffold_14 (21794620-21794443) | |
| 355-549, gnl|oryCun1|scaffold_134319 (3229-3406) | |
| 355-549, gnl|panTro1|chr8 (47334146-47334323) | |
| 355-549, gnl|rheMac2|chr9 (49413732-49413909) | |
| 355-549, gnl|rn3|chr16 (9880176-9879999) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-246, gnl|bosTau2|chr28 (31982787-31983032) | |
| 1-246, gnl|canFam2|chr4 (37901907-37902588) | |
| 1-246, gnl|canFam2|chr4 (37901907-37902671) | |
| 1-246, gnl|dasNov1|scaffold_106441 (1423-2181) | |
| 1-246, gnl|dasNov1|scaffold_62336 (4637-3964) | |
| 1-246, gnl|echTel1|scaffold_250511 (715-54) | |
| 1-246, gnl|echTel1|scaffold_250511 (715-4) | |
| 1-246, gnl|galGal2|chr6 (2161962-2162655) | |
| 1-246, gnl|galGal2|chr6 (2161962-2162738) | |
| 1-246, gnl|hg17|chr10 (46318420-46319182) | |
| 1-246, gnl|Hg17|chr10 (88902371-88902616) | |
| 1-246, gnl|hg17|chr14 (87489355-87490035) | |
| 1-246, gnl|mm7|chr14 (31700835-31700199) | |
| 1-246, gnl|mm7|chr14 (31700835-31700116) | |
| 1-246, gnl|Mm7|chr14 (31700365-31700120) | |
| 1-246, gnl|monDom2|scaffold_14 (21801768-21801114) | |
| 1-246, gnl|monDom2|scaffold_14 (21801768-21801031) | |
| 1-246, gnl|panTro1|chr15_random (19215789-19215109) | |
| 1-246, gnl|panTro1|chr8 (47313897-47314664) | |
| 1-246, gnl|rheMac2|chr9 (49395381-49396062) | |
| 1-246, gnl|rheMac2|chr9 (49395381-49396145) | |
| 1-246, gnl|rn3|chr16 (9904541-9903860) | |
| 1-246, gnl|rn3|chr16 (9904541-9903777) | |
| 1-246, gnl|xenTro1|scaffold_44 (374664-375258) | |
| 1-246, gnl|xenTro1|scaffold_44 (374676-375338) | |
| 355-549, gnl|bosTau2|chr28 (31996360-31996554) | |
| 355-549, gnl|canFam2|chr4 (37915242-37915419) | |
| 355-549, gnl|dasNov1|scaffold_62336 (3777-3600) | |
| 355-549, gnl|hg17|chr10 (46338176-46338353) | |
| 355-549, gnl|Hg17|chr10 (88920215-88920409) | |
| 355-549, gnl|loxAfr1|scaffold_22746 (11681-11858) | |
| 355-549, gnl|mm7|chr14 (31681991-31681814) | |
| 355-549, gnl|Mm7|chr14 (31681990-31681796) | |
| 355-549, gnl|monDom2|scaffold_14 (21794620-21794443) | |
| 355-549, gnl|oryCun1|scaffold_134319 (3229-3406) | |
| 355-549, gnl|panTro1|chr8 (47334146-47334323) | |
| 355-549, gnl|rheMac2|chr9 (49413732-49413909) | |
| 355-549, gnl|rn3|chr16 (9880176-9879999) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| spl (0.143184) | |
| pgl (0.118483) |