Non-Coding RNA Search

Ss1.1-rpgl18_p2.5

Sequence:


               
               AGCCTCGGTTTCCATGTCTTTAAAATGGGCCTAAGGAATTCCCTGATGGCTCAGTAGGTT
GAGGATCCGGTGTTGCTATTGTTATTATTATTATTATTATTATTATTATTACAAAATAGG
CCTGAAAGTCCCACCTGATAGGGTCGTTGTAAGGTTCAGTGAACTTAAAAGTGGGCCAGA
TGCTTGACCGGGTGGCGTCTAATAAGCACTCAGTATGGGTGTCATCACTGCTTGAATTTT
CTCTCTTGCCTACATTCATTCCTGCAGTCCACACGCAGCATTCCTGCTGTTAAAGAGCAA
TCACATCATTTTCAAAAATTGGAACCACTTTCCAACAGTGGATAAAGCAGTTTGGGTTCG
TTTTCTCTTTTTTTTGGTTTGTTTTTAATTGAAATATAGTTGATTTACAATGTTTCAGCT
ATCCAGCAAAGTGATTTAGTTTTATATATATATGTTGTATATATGTTCTTTTCCTGATTC
TTTTCCACCATAGCTTATCTCAAGATATTGAATGTAGGTTTCTGTGCTATACAGTAGGTC
CTTGTTGTTTATCTGTTTTATATGTAATAGTGTGTGTCTGCTACTCATCAACTCCTGATT
TATCCCTTTCCCCTTGAGTAACTGTAAATTTGTTTTCTATGTCTGTGAGTCTCTGCTGTT
TTCATGTCGGCATCATTTCCTTCTTGTTTTCTGGGCTGCCAGAGAGGCTTCGTGGTTATC
ATTTTTAATTACTGTGCGCGCCAATAAATCCCTTTTTAACATTGGCCCTCTCGCTGGCCC
TCTCATGTGTACTTTGAACTTGTACTTTGTCTGCTGTTATAAATGCCACTGCGGTCACCA
TCGTTGTGACATTTGCTGGCTTCCCTCACTGGTACTTCCCAAACTACGTGGAGGCTGTGT
GTTATGTACCATCACTGTAACTCTAGTGGCTTTTGGTTTGCTTCATTTATTTATTTTTTT
TATTTTTTACTTTTGGCTTTGGAGGGGTGCACCTGCAGCATATGTTGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGCCTCGGTTTCCATGTCTTTAAAATGGGCCTAAGGAATTCCCTGATGGCTCAGTAGGTT
GAGGATCCGGTGTTGCTATTGTTATTATTATTATTATTATTATTATTATTACAAAATAGG
CCTGAAAGTCCCACCTGATAGGGTCGTTGTAAGGTTCAGTGAACTTAAAAGTGGGCCAGA
TGCTTGACCGGGTGGCGTCTAATAAGCACTCAGTATGGGTGTCATCACTGCTTGAATTTT
CTCTCTTGCCTACATTCATTCCTGCAGTCCACACGCAGCATTCCTGCTGTTAAAGAGCAA
TCACATCATTTTCAAAAATTGGAACCACTTTCCAACAGTGGATAAAGCAGTTTGGGTTCG
TTTTCTCTTTTTTTTGGTTTGTTTTTAATTGAAATATAGTTGATTTACAATGTTTCAGCT
ATCCAGCAAAGTGATTTAGTTTTATATATATATGTTGTATATATGTTCTTTTCCTGATTC
TTTTCCACCATAGCTTATCTCAAGATATTGAATGTAGGTTTCTGTGCTATACAGTAGGTC
CTTGTTGTTTATCTGTTTTATATGTAATAGTGTGTGTCTGCTACTCATCAACTCCTGATT
TATCCCTTTCCCCTTGAGTAACTGTAAATTTGTTTTCTATGTCTGTGAGTCTCTGCTGTT
TTCATGTCGGCATCATTTCCTTCTTGTTTTCTGGGCTGCCAGAGAGGCTTCGTGGTTATC
ATTTTTAATTACTGTGCGCGCCAATAAATCCCTTTTTAACATTGGCCCTCTCGCTGGCCC
TCTCATGTGTACTTTGAACTTGTACTTTGTCTGCTGTTATAAATGCCACTGCGGTCACCA
TCGTTGTGACATTTGCTGGCTTCCCTCACTGGTACTTCCCAAACTACGTGGAGGCTGTGT
GTTATGTACCATCACTGTAACTCTAGTGGCTTTTGGTTTGCTTCATTTATTTATTTTTTT
TATTTTTTACTTTTGGCTTTGGAGGGGTGCACCTGCAGCATATGTTGT

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               368-661, gnl|bosTau2|chr1 (34771278-34771586)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               368-661, gnl|bosTau2|chr1 (34771278-34771586)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

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               tbr (0.154178)
               

               
               thg (0.126791)
               

               
               pgl (0.118483)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tbr (0.154178)
               

               
               thg (0.126791)
               

               
               pgl (0.118483)