Ss1.1-rpgl19_g1.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TCTCCACAAAACCCCAGTCATAGATAAGTTCTCCCATCTCCAGCTCTGTGCAGTAGACAC GTCAGCTTCAAGTCAATTCATAACCAAGTCTTTGAACGCTGCTATGAATTGCACTGTGAA ACACGCTCTTCCTGCCGGGAATCTGTGCATGCACACGCGTGCATGCACGCACACACACAC AGACACCCCGTTTTCTTTGCTCCTCCCGGCCTTGTTCATTAGAGCTTGTCCGTCTTGAAC GTCAGGCTGAATTCGGGAAAGGATTGGAGTCCTCTCACTCCACGGTGGGGCTGCTCTCTC ATTCTGAGGCTCCTGTGTCGTTCTGGCGTTAACAAGTGCTTAAACTGCTATGTTGGCAAC AGCACAGAAAACTAATATTTTTAAGCAGATAATCTTGGCAGTGAGTGAGAAACATTCATT TCACAGAAGCACAACTCCCAACCAAGCCCTTAGGGAAAGTCCTCTTTAATAGAGTCACAT GCTCAGTGAATATTAATTTAGTTCTGCTTAAGTGATTACTGTGAGAACTTTGAATAGCCA CCTAATCAATAAACCCTGCATGACAAACCTGCAACTATCTTATCAGCTGTTATTGGCAAG TGATCTTAAGCAGTTGCTTCTTCN------------GTGTGAACCCCACACAAGACAAGA ------------AGCTGACGTGCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TCTCCACAAAACCCCAGTCATAGATAAGTTCTCCCATCTCCAGCTCTGTGCAGTAGACAC GTCAGCTTCAAGTCAATTCATAACCAAGTCTTTGAACGCTGCTATGAATTGCACTGTGAA ACACGCTCTTCCTGCCGGGAATCTGTGCATGCACACGCGTGCATGCACGCACACACACAC AGACACCCCGTTTTCTTTGCTCCTCCCGGCCTTGTTCATTAGAGCTTGTCCGTCTTGAAC GTCAGGCTGAATTCGGGAAAGGATTGGAGTCCTCTCACTCCACGGTGGGGCTGCTCTCTC ATTCTGAGGCTCCTGTGTCGTTCTGGCGTTAACAAGTGCTTAAACTGCTATGTTGGCAAC AGCACAGAAAACTAATATTTTTAAGCAGATAATCTTGGCAGTGAGTGAGAAACATTCATT TCACAGAAGCACAACTCCCAACCAAGCCCTTAGGGAAAGTCCTCTTTAATAGAGTCACAT GCTCAGTGAATATTAATTTAGTTCTGCTTAAGTGATTACTGTGAGAACTTTGAATAGCCA CCTAATCAATAAACCCTGCATGACAAACCTGCAACTATCTTATCAGCTGTTATTGGCAAG TGATCTTAAGCAGTTGCTTCTTCN------------GTGTGAACCCCACACAAGACAAGA ------------AGCTGACGTGCT |
| Aligned organism(s): 29 entry(ies) | More info |
| Aligned organism(s): 29 entry(ies) | Help | Less info |
| 9-148, gnl|bosTau2|chr14 (6117613-6117744) | |
| 9-148, gnl|canFam2|chr13 (30150059-30150295) | |
| 9-148, gnl|dasNov1|scaffold_24229 (42746-42525) | |
| 9-148, gnl|echTel1|scaffold_290130 (33765-33587) | |
| 9-148, gnl|galGal2|chr2 (143226578-143226411) | |
| 9-148, gnl|hg17|chr8 (131134880-131135090) | |
| 9-148, gnl|loxAfr1|scaffold_168024 (1764-1989) | |
| 9-148, gnl|mm7|chr15 (64163776-64163994) | |
| 9-148, gnl|Mm7|chr15 (64163907-64163773) | |
| 9-148, gnl|monDom2|scaffold_3 (21878588-21878372) | |
| 9-148, gnl|oryCun1|scaffold_213967 (61501-61715) | |
| 9-148, gnl|panTro1|chr7 (133832121-133832331) | |
| 9-148, gnl|rheMac2|chr8 (132615239-132615449) | |
| 9-148, gnl|rn3|chr7 (101336920-101337145) | |
| 223-521, gnl|bosTau2|chr14 (6117803-6118101) | |
| 223-521, gnl|canFam2|chr13 (30149606-30150000) | |
| 223-521, gnl|dasNov1|scaffold_24229 (43211-42818) | |
| 223-521, gnl|echTel1|scaffold_290130 (34133-33805) | |
| 223-521, gnl|galGal2|chr2 (143226993-143226636) | |
| 223-521, gnl|hg17|chr8 (131134418-131134813) | |
| 223-521, gnl|Hg17|chr8 (131134828-131134507) | |
| 223-521, gnl|loxAfr1|scaffold_168024 (1311-1692) | |
| 223-521, gnl|mm7|chr15 (64163292-64163693) | |
| 223-521, gnl|Mm7|chr15 (64163708-64163391) | |
| 223-521, gnl|monDom2|scaffold_3 (21879071-21878677) | |
| 223-521, gnl|oryCun1|scaffold_213967 (61044-61423) | |
| 223-521, gnl|panTro1|chr7 (133831659-133832054) | |
| 223-521, gnl|rheMac2|chr8 (132614777-132615172) | |
| 223-521, gnl|rn3|chr7 (101336426-101336811) |
| Aligned organism(s): 29 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 9-148, gnl|bosTau2|chr14 (6117613-6117744) | |
| 9-148, gnl|canFam2|chr13 (30150059-30150295) | |
| 9-148, gnl|dasNov1|scaffold_24229 (42746-42525) | |
| 9-148, gnl|echTel1|scaffold_290130 (33765-33587) | |
| 9-148, gnl|galGal2|chr2 (143226578-143226411) | |
| 9-148, gnl|hg17|chr8 (131134880-131135090) | |
| 9-148, gnl|loxAfr1|scaffold_168024 (1764-1989) | |
| 9-148, gnl|mm7|chr15 (64163776-64163994) | |
| 9-148, gnl|Mm7|chr15 (64163907-64163773) | |
| 9-148, gnl|monDom2|scaffold_3 (21878588-21878372) | |
| 9-148, gnl|oryCun1|scaffold_213967 (61501-61715) | |
| 9-148, gnl|panTro1|chr7 (133832121-133832331) | |
| 9-148, gnl|rheMac2|chr8 (132615239-132615449) | |
| 9-148, gnl|rn3|chr7 (101336920-101337145) | |
| 223-521, gnl|bosTau2|chr14 (6117803-6118101) | |
| 223-521, gnl|canFam2|chr13 (30149606-30150000) | |
| 223-521, gnl|dasNov1|scaffold_24229 (43211-42818) | |
| 223-521, gnl|echTel1|scaffold_290130 (34133-33805) | |
| 223-521, gnl|galGal2|chr2 (143226993-143226636) | |
| 223-521, gnl|hg17|chr8 (131134418-131134813) | |
| 223-521, gnl|Hg17|chr8 (131134828-131134507) | |
| 223-521, gnl|loxAfr1|scaffold_168024 (1311-1692) | |
| 223-521, gnl|mm7|chr15 (64163292-64163693) | |
| 223-521, gnl|Mm7|chr15 (64163708-64163391) | |
| 223-521, gnl|monDom2|scaffold_3 (21879071-21878677) | |
| 223-521, gnl|oryCun1|scaffold_213967 (61044-61423) | |
| 223-521, gnl|panTro1|chr7 (133831659-133832054) | |
| 223-521, gnl|rheMac2|chr8 (132614777-132615172) | |
| 223-521, gnl|rn3|chr7 (101336426-101336811) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pgl (0.118483) | |
| cbl (0.114797) |