Non-Coding RNA Search

Ss1.1-rpgl23_c19.5

Sequence:


               
               GAGGGTGAAGCCCCGGAGTGTCTGTTACACGCAGACTTTTCCTCTTTATTTGGACACCCC
CAAGCAACAAGCGGACACCTCCGAGCCAGAGGCCAGACCCAGCCCCTCGCCCCTCCTCAC
CTCTGGTCCCAGTCAGCCCACCTTCATCCCCAACCCGCCGAATCAACGCTTGTTCTCAGA
GACCGTCGCTGCCCACCCCACCCCGCAACACCCCACACCTCCCTCGGGCCCCCTGGCTTC
ACAGCCTCATGTTGTAAATACGGTTGTACAGTTTGTAATCATCAAATAACCCGTGTCATC
GGCCTCGCCTGCGCCCCTTCTCACCTGGAGAAAGGCCAGGGAACGAGAAGAGCTTCAGGG
CCATCTCTGTGTGAGACGCTATGTATATTCCTGTAAGATTGCATTTTTATCTACGGAATG
ATGTTATTTAAAAAACAAACAAAAAAACCCAAAAAACAAGAATTGCAAATAAATTTCTTA
ACAATGAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGGGTGAAGCCCCGGAGTGTCTGTTACACGCAGACTTTTCCTCTTTATTTGGACACCCC
CAAGCAACAAGCGGACACCTCCGAGCCAGAGGCCAGACCCAGCCCCTCGCCCCTCCTCAC
CTCTGGTCCCAGTCAGCCCACCTTCATCCCCAACCCGCCGAATCAACGCTTGTTCTCAGA
GACCGTCGCTGCCCACCCCACCCCGCAACACCCCACACCTCCCTCGGGCCCCCTGGCTTC
ACAGCCTCATGTTGTAAATACGGTTGTACAGTTTGTAATCATCAAATAACCCGTGTCATC
GGCCTCGCCTGCGCCCCTTCTCACCTGGAGAAAGGCCAGGGAACGAGAAGAGCTTCAGGG
CCATCTCTGTGTGAGACGCTATGTATATTCCTGTAAGATTGCATTTTTATCTACGGAATG
ATGTTATTTAAAAAACAAACAAAAAAACCCAAAAAACAAGAATTGCAAATAAATTTCTTA
ACAATGAAAAAAAAAAAAAAAAAA

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               38-486, gnl|bosTau2|chr5 (66187026-66187460)
               

               
               38-486, gnl|Hg17|chr12 (2676847-2677373)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               38-486, gnl|bosTau2|chr5 (66187026-66187460)
               

               
               38-486, gnl|Hg17|chr12 (2676847-2677373)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               ece (0.229305)
               

               
               cag (0.151194)
               

               
               pgl (0.118483)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ece (0.229305)
               

               
               cag (0.151194)
               

               
               pgl (0.118483)

	38-486, gnl\|bosTau2\|chr5 (66187026-66187460)
	38-486, gnl\|Hg17\|chr12 (2676847-2677373)