Non-Coding RNA Search

Ss1.1-rpgl23_i7.5

Sequence:


               
               CGCACGAAGAGCACCATGAGCCCCCAGGAAGACAGTGAAAACCCCCCGTGCACCAACGAC
CCTTTGTCGGCCGGGGTGGACTGTGGGAAACCACGACGAGGACTTGTGAGCTGGACACCC
CGCCTCAGACCGCCGCCCTCCTCAGTCACAAGTTCCACCACTACCGCCTGCACCACCCCA
CGCTGCACCACAGCCACCACCTGCAGGCGGCCGTGACCGTACACACTGTGGACGCGGAAT
GCTGACCCCGCACCCCCATCTGAAAGGTGGGATCTGGGAGCTCCCGAATGTCCTAGCGGG
AAACAGAGCCAGCCTACCATCCAGGAGAGCCCCTTGGGTTTGCGCGGTGTCCAGAGCGGT
GTCACTCATCTTCCTGCCCGTTGGCACATCCCGACACGAGAGGAACCACGGCCCTATCAC
ATCGGTGAGGGTGCGAGGGTGGTTCTGAAACGGAGGGGAAACACGTCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGCACGAAGAGCACCATGAGCCCCCAGGAAGACAGTGAAAACCCCCCGTGCACCAACGAC
CCTTTGTCGGCCGGGGTGGACTGTGGGAAACCACGACGAGGACTTGTGAGCTGGACACCC
CGCCTCAGACCGCCGCCCTCCTCAGTCACAAGTTCCACCACTACCGCCTGCACCACCCCA
CGCTGCACCACAGCCACCACCTGCAGGCGGCCGTGACCGTACACACTGTGGACGCGGAAT
GCTGACCCCGCACCCCCATCTGAAAGGTGGGATCTGGGAGCTCCCGAATGTCCTAGCGGG
AAACAGAGCCAGCCTACCATCCAGGAGAGCCCCTTGGGTTTGCGCGGTGTCCAGAGCGGT
GTCACTCATCTTCCTGCCCGTTGGCACATCCCGACACGAGAGGAACCACGGCCCTATCAC
ATCGGTGAGGGTGCGAGGGTGGTTCTGAAACGGAGGGGAAACACGTCT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               10-468, gnl|bosTau2|chr3 (54962894-54962447)
               

               
               10-468, gnl|Hg17|chr1 (64869032-64869496)
               

               
               10-468, gnl|Mm7|chr4 (100379306-100379714)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               10-468, gnl|bosTau2|chr3 (54962894-54962447)
               

               
               10-468, gnl|Hg17|chr1 (64869032-64869496)
               

               
               10-468, gnl|Mm7|chr4 (100379306-100379714)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               eru (0.120048)
               

               
               pgl (0.118483)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eru (0.120048)
               

               
               pgl (0.118483)

	10-468, gnl\|bosTau2\|chr3 (54962894-54962447)
	10-468, gnl\|Hg17\|chr1 (64869032-64869496)
	10-468, gnl\|Mm7\|chr4 (100379306-100379714)