Non-Coding RNA Search

Ss1.1-rpgl25_f16.5

Sequence:


               
               GCTGGGCCTCACACTGATGGCTGCCTTAGAAACCCAGCTTCCTTAGGCTTTGACAAGCCA
GAGTCTCTCCTTGGGAAAACAGACCCGGGTTTAACGTGCCGACTACTGCGAACTCCACAT
GGAGGTCTGGAAGAACCTGGAAGGCAATATTGGCCAACTTTTCCCCCTTTTTAAGTAGAG
GACAAATGAACACGATTTTTAAAGTACCTTTAATGTGCATGAGTGATGAATGAGTCTACA
TGAATTAACTGAGAGTCCCCTTCCTGTGTCCAAGTCATCAGTTAGTTAAGGCCCCTTTTC
CTTCTTTCTCTTTAGGGGTAAGAATTACCTTTTGAGCCTTCAGAGTTTTTTTATTTTTTT
TTAAGTGGTAACAATTTTGAGGTCCTACTTTTTCCTTCTTATTGTGGAAACTAATGTGGT
GGTGATCCTGTTCCCACACCTATAAGACAGCAAGATAGTTTAAAATTACCTTTCATGTTG
AAAAGTTTGAAACTGAGAATCCAGTGATATTTAAAATACAGAATAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCTGGGCCTCACACTGATGGCTGCCTTAGAAACCCAGCTTCCTTAGGCTTTGACAAGCCA
GAGTCTCTCCTTGGGAAAACAGACCCGGGTTTAACGTGCCGACTACTGCGAACTCCACAT
GGAGGTCTGGAAGAACCTGGAAGGCAATATTGGCCAACTTTTCCCCCTTTTTAAGTAGAG
GACAAATGAACACGATTTTTAAAGTACCTTTAATGTGCATGAGTGATGAATGAGTCTACA
TGAATTAACTGAGAGTCCCCTTCCTGTGTCCAAGTCATCAGTTAGTTAAGGCCCCTTTTC
CTTCTTTCTCTTTAGGGGTAAGAATTACCTTTTGAGCCTTCAGAGTTTTTTTATTTTTTT
TTAAGTGGTAACAATTTTGAGGTCCTACTTTTTCCTTCTTATTGTGGAAACTAATGTGGT
GGTGATCCTGTTCCCACACCTATAAGACAGCAAGATAGTTTAAAATTACCTTTCATGTTG
AAAAGTTTGAAACTGAGAATCCAGTGATATTTAAAATACAGAATAAAA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               11-528, gnl|bosTau2|chr28 (564660-565175)
               

               
               11-528, gnl|Hg17|chr1 (225765848-225765345)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               11-528, gnl|bosTau2|chr28 (564660-565175)
               

               
               11-528, gnl|Hg17|chr1 (225765848-225765345)

Expressed library(ies): 4 entry(ies)

More info

Expressed library(ies): 4 entry(ies)

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               jca (0.22792)
               

               
               aor (0.195274)
               

               
               fco (0.157208)
               

               
               pgl (0.118483)

Expressed library(ies): 4 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               jca (0.22792)
               

               
               aor (0.195274)
               

               
               fco (0.157208)
               

               
               pgl (0.118483)

	11-528, gnl\|bosTau2\|chr28 (564660-565175)
	11-528, gnl\|Hg17\|chr1 (225765848-225765345)