Non-Coding RNA Search

Ss1.1-rpgl25_o6.5

Sequence:


               
               CCGGCCCTGAGCAGCGCATCGTCTGAGCTCTGACGGCGCCAGAGGTCACCATGAAGTTCA
ACCCCTTCGTGACTTCGGACCGCAGCAAAAACCGCAAACGTCATTTCAATGCCCCCTCCC
ACGTGCGCAGGAAGATCATGTCGTCTCCACTCTCCAAGGAGCTGCGGCAGAAGTACAACG
TTCGCTCCATGCCCATCCGCAAGGACGACGAGGTCCAGGTGGTCCGAGGACATTACAAAG
GTCAGCAAATTGGCAAAGTAGTCCAGGTGTACAGAAAGAAATATGTCATCTACATCGAGC
GGGTGCAGCGGGAGAAGGCTAATGGTACGACTGTCCACGTGGGCATTCACCCGAGCAAGG
TAGTTATCACCAGGCTAAAACTGGACAAAGATCGGAAAAAAATTCTTGAGCGCAAAGCCA
AATCTCGACAAGTTGGAAAAGAGAAAGGCAAATATAAGGAAGAACTTATTGAGAAAATGC
AGGAGTGAATATACCCGTTCTGCAACATCAGTTTATCTGTAGATTTTTTTTTTTTCCTGG
TGTGTGTTCTTTTGAAACTTTTCAAGATGTCTCTGCAGCATTTTGTTTCCTTCCTGTTTT
TGTTATTGATATGTGGCTCTGTAAATCTGCTCTTGCTGTTTTAATAATTTTATGAATAAA
AATTGGAAATGTAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCGGCCCTGAGCAGCGCATCGTCTGAGCTCTGACGGCGCCAGAGGTCACCATGAAGTTCA
ACCCCTTCGTGACTTCGGACCGCAGCAAAAACCGCAAACGTCATTTCAATGCCCCCTCCC
ACGTGCGCAGGAAGATCATGTCGTCTCCACTCTCCAAGGAGCTGCGGCAGAAGTACAACG
TTCGCTCCATGCCCATCCGCAAGGACGACGAGGTCCAGGTGGTCCGAGGACATTACAAAG
GTCAGCAAATTGGCAAAGTAGTCCAGGTGTACAGAAAGAAATATGTCATCTACATCGAGC
GGGTGCAGCGGGAGAAGGCTAATGGTACGACTGTCCACGTGGGCATTCACCCGAGCAAGG
TAGTTATCACCAGGCTAAAACTGGACAAAGATCGGAAAAAAATTCTTGAGCGCAAAGCCA
AATCTCGACAAGTTGGAAAAGAGAAAGGCAAATATAAGGAAGAACTTATTGAGAAAATGC
AGGAGTGAATATACCCGTTCTGCAACATCAGTTTATCTGTAGATTTTTTTTTTTTCCTGG
TGTGTGTTCTTTTGAAACTTTTCAAGATGTCTCTGCAGCATTTTGTTTCCTTCCTGTTTT
TGTTATTGATATGTGGCTCTGTAAATCTGCTCTTGCTGTTTTAATAATTTTATGAATAAA
AATTGGAAATGTAAAAAAAAAAAA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               RL26L_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               RL26L_HUMAN

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               36-489, gnl|bosTau2|chr11 (30063271-30062818)
               

               
               36-489, gnl|Hg17|chr5 (55836671-55836218)
               

               
               36-489, gnl|Mm7|chr5 (3242423-3242875)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               36-489, gnl|bosTau2|chr11 (30063271-30062818)
               

               
               36-489, gnl|Hg17|chr5 (55836671-55836218)
               

               
               36-489, gnl|Mm7|chr5 (3242423-3242875)

Expressed library(ies): 56 entry(ies)

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Expressed library(ies): 56 entry(ies)

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               cte (2.34192)
               

               
               pgl (1.18483)
               

               
               sto (1.07894)
               

               
               cst (0.840218)
               

               
               cje (0.826173)
               

               
               thg (0.633955)
               

               
               spc (0.566829)
               

               
               cmu (0.55918)
               

               
               pro (0.512033)
               

               
               cki (0.495704)
               

               
               mga (0.480615)
               

               
               lun (0.451467)
               

               
               lin (0.436808)
               

               
               csk (0.422238)
               

               
               tes (0.415628)
               

               
               che (0.408942)
               

               
               elu (0.385356)
               

               
               bla (0.373042)
               

               
               gul (0.355177)
               

               
               rec (0.346141)
               

               
               cut (0.339847)
               

               
               fco (0.314416)
               

               
               isp (0.300752)
               

               
               fat (0.294855)
               

               
               ldo (0.291008)
               

               
               ste (0.270416)
               

               
               lyg (0.266205)
               

               
               nmm (0.265604)
               

               
               ova (0.258264)
               

               
               sug (0.254582)
               

               
               eru (0.240096)
               

               
               cbe (0.239234)
               

               
               pan (0.23596)
               

               
               mgp (0.230681)
               

               
               ece (0.229305)
               

               
               hea (0.204499)
               

               
               fcc (0.197785)
               

               
               col (0.195008)
               

               
               mgm (0.180343)
               

               
               fty (0.17584)
               

               
               ill (0.175593)
               

               
               ton (0.1755)
               

               
               sin (0.174948)
               

               
               mcp (0.170648)
               

               
               fhi (0.169578)
               

               
               nco (0.161734)
               

               
               bfe (0.149858)
               

               
               ski (0.146735)
               

               
               hlv (0.139256)
               

               
               nca (0.136874)
               

               
               pla (0.133672)
               

               
               cov (0.132153)
               

               
               ese (0.126502)
               

               
               eep (0.122564)
               

               
               ebs (0.118301)
               

               
               eje (0.0988338)

Expressed library(ies): 56 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cte (2.34192)
               

               
               pgl (1.18483)
               

               
               sto (1.07894)
               

               
               cst (0.840218)
               

               
               cje (0.826173)
               

               
               thg (0.633955)
               

               
               spc (0.566829)
               

               
               cmu (0.55918)
               

               
               pro (0.512033)
               

               
               cki (0.495704)
               

               
               mga (0.480615)
               

               
               lun (0.451467)
               

               
               lin (0.436808)
               

               
               csk (0.422238)
               

               
               tes (0.415628)
               

               
               che (0.408942)
               

               
               elu (0.385356)
               

               
               bla (0.373042)
               

               
               gul (0.355177)
               

               
               rec (0.346141)
               

               
               cut (0.339847)
               

               
               fco (0.314416)
               

               
               isp (0.300752)
               

               
               fat (0.294855)
               

               
               ldo (0.291008)
               

               
               ste (0.270416)
               

               
               lyg (0.266205)
               

               
               nmm (0.265604)
               

               
               ova (0.258264)
               

               
               sug (0.254582)
               

               
               eru (0.240096)
               

               
               cbe (0.239234)
               

               
               pan (0.23596)
               

               
               mgp (0.230681)
               

               
               ece (0.229305)
               

               
               hea (0.204499)
               

               
               fcc (0.197785)
               

               
               col (0.195008)
               

               
               mgm (0.180343)
               

               
               fty (0.17584)
               

               
               ill (0.175593)
               

               
               ton (0.1755)
               

               
               sin (0.174948)
               

               
               mcp (0.170648)
               

               
               fhi (0.169578)
               

               
               nco (0.161734)
               

               
               bfe (0.149858)
               

               
               ski (0.146735)
               

               
               hlv (0.139256)
               

               
               nca (0.136874)
               

               
               pla (0.133672)
               

               
               cov (0.132153)
               

               
               ese (0.126502)
               

               
               eep (0.122564)
               

               
               ebs (0.118301)
               

               
               eje (0.0988338)

	36-489, gnl\|bosTau2\|chr11 (30063271-30062818)
	36-489, gnl\|Hg17\|chr5 (55836671-55836218)
	36-489, gnl\|Mm7\|chr5 (3242423-3242875)

	cte (2.34192)
	pgl (1.18483)
	sto (1.07894)
	cst (0.840218)
	cje (0.826173)
	thg (0.633955)
	spc (0.566829)
	cmu (0.55918)
	pro (0.512033)
	cki (0.495704)
	mga (0.480615)
	lun (0.451467)
	lin (0.436808)
	csk (0.422238)
	tes (0.415628)
	che (0.408942)
	elu (0.385356)
	bla (0.373042)
	gul (0.355177)
	rec (0.346141)
	cut (0.339847)
	fco (0.314416)
	isp (0.300752)
	fat (0.294855)
	ldo (0.291008)
	ste (0.270416)
	lyg (0.266205)
	nmm (0.265604)
	ova (0.258264)
	sug (0.254582)
	eru (0.240096)
	cbe (0.239234)
	pan (0.23596)
	mgp (0.230681)
	ece (0.229305)
	hea (0.204499)
	fcc (0.197785)
	col (0.195008)
	mgm (0.180343)
	fty (0.17584)
	ill (0.175593)
	ton (0.1755)
	sin (0.174948)
	mcp (0.170648)
	fhi (0.169578)
	nco (0.161734)
	bfe (0.149858)
	ski (0.146735)
	hlv (0.139256)
	nca (0.136874)
	pla (0.133672)
	cov (0.132153)
	ese (0.126502)
	eep (0.122564)
	ebs (0.118301)
	eje (0.0988338)