Non-Coding RNA Search

Ss1.1-rpgl26_g21.5

Sequence:


               
               AGAAGATTTAACAATCTGTTTGGCAAAACAGGGACATACAACGTTTCCACCCCAGAAACC
ACCAGCTCATCCCTGGAAAATACATCCAGTGCCTATTCGTTGCTCAACTAAGAACGGGAA
AATCCAGCCCCAGGGACCTCTTGGGGGACAGTGGATGTGCTTCGAAAAAGAGGTCCTTTC
CAAGCCATGGGTAAAATGTTTCCTCCACCGGCTTCTGGGAGCAGATGCTGAAGAGACTTT
TTCATTAGGGAAGGCACTTTCTTTTGTAAAGACAGACGAAAAGGAATTGTTACATTTATT
TTGCTGTCACATCCCCACCCCCTGTGAGATGCCAAATGTGTATAGTATTTAAGTGAAACT
CACACCGACTTCTCTGTCTATATTGTAAAATAGGATCTCAGAGACATTTTTACTTTTCAC
ACCTTGGGCCCACAGATAGGCTTTGATTAAAATAATAAACAAAATACTAATACCTAGGAA
ATACTTCAGTAAATTCTGGGAAGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGAAGATTTAACAATCTGTTTGGCAAAACAGGGACATACAACGTTTCCACCCCAGAAACC
ACCAGCTCATCCCTGGAAAATACATCCAGTGCCTATTCGTTGCTCAACTAAGAACGGGAA
AATCCAGCCCCAGGGACCTCTTGGGGGACAGTGGATGTGCTTCGAAAAAGAGGTCCTTTC
CAAGCCATGGGTAAAATGTTTCCTCCACCGGCTTCTGGGAGCAGATGCTGAAGAGACTTT
TTCATTAGGGAAGGCACTTTCTTTTGTAAAGACAGACGAAAAGGAATTGTTACATTTATT
TTGCTGTCACATCCCCACCCCCTGTGAGATGCCAAATGTGTATAGTATTTAAGTGAAACT
CACACCGACTTCTCTGTCTATATTGTAAAATAGGATCTCAGAGACATTTTTACTTTTCAC
ACCTTGGGCCCACAGATAGGCTTTGATTAAAATAATAAACAAAATACTAATACCTAGGAA
ATACTTCAGTAAATTCTGGGAAGG

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               29-504, gnl|bosTau2|chr23 (18805910-18806387)
               

               
               29-504, gnl|Hg17|chr6 (46929770-46929288)
               

               
               29-504, gnl|Mm7|chr17 (41577226-41577725)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               29-504, gnl|bosTau2|chr23 (18805910-18806387)
               

               
               29-504, gnl|Hg17|chr6 (46929770-46929288)
               

               
               29-504, gnl|Mm7|chr17 (41577226-41577725)

Expressed library(ies): 5 entry(ies)

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Expressed library(ies): 5 entry(ies)

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               elu (0.385356)
               

               
               fat (0.147427)
               

               
               eep (0.122564)
               

               
               pgl (0.118483)
               

               
               cty (0.10408)

Expressed library(ies): 5 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               elu (0.385356)
               

               
               fat (0.147427)
               

               
               eep (0.122564)
               

               
               pgl (0.118483)
               

               
               cty (0.10408)

	29-504, gnl\|bosTau2\|chr23 (18805910-18806387)
	29-504, gnl\|Hg17\|chr6 (46929770-46929288)
	29-504, gnl\|Mm7\|chr17 (41577226-41577725)

	elu (0.385356)
	fat (0.147427)
	eep (0.122564)
	pgl (0.118483)
	cty (0.10408)