Ss1.1-rpgl33_d22.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCCGGACGCGTGAGAGGGGCAGTAGCTCGGACGCTCTGGCCAGCTGCGGGCAGATCTCCT CATATTTTGGATTCTGGCTATGTTATAATGAATGACACTTTGACATCAGATGTCACTGGT CGGAGAGTTGAAGTTAATGGAGAACATGCAACTGTGCGTTTTTCTGGCATTGTCCCTCCT GTGGCAGGTCTCTGGTTAGGAGTAGAATGGGACAATCCTGAAAGGGGAAAGCATGATGGA AGCCACGAAGGGACTGTGTATTTTAAATGCAGGCATCCAACAGGAGGATCTTTTATTCGT CCAAACAAAGTAAATTTTGGAGTAGACTTTCTCACTGCAATTAAGAATCGCTATGTGTTA GAAGATGAACCAGAGGAAGAAGAAAAAGAGCAAACTGTTATAATTGGAAATAAACCTGTA GAAACCATTGGTTTTGACTCTGTTGTAAAACAACAAAGTCAGTTGAGCAAGCTGCAGGAA GTTTCTCTGAGGAACTGCGCAGTAAACGGTGCTGGTGACAAACGAGGAATTGCCCAAGTG TGTCCTAATATT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCCGGACGCGTGAGAGGGGCAGTAGCTCGGACGCTCTGGCCAGCTGCGGGCAGATCTCCT CATATTTTGGATTCTGGCTATGTTATAATGAATGACACTTTGACATCAGATGTCACTGGT CGGAGAGTTGAAGTTAATGGAGAACATGCAACTGTGCGTTTTTCTGGCATTGTCCCTCCT GTGGCAGGTCTCTGGTTAGGAGTAGAATGGGACAATCCTGAAAGGGGAAAGCATGATGGA AGCCACGAAGGGACTGTGTATTTTAAATGCAGGCATCCAACAGGAGGATCTTTTATTCGT CCAAACAAAGTAAATTTTGGAGTAGACTTTCTCACTGCAATTAAGAATCGCTATGTGTTA GAAGATGAACCAGAGGAAGAAGAAAAAGAGCAAACTGTTATAATTGGAAATAAACCTGTA GAAACCATTGGTTTTGACTCTGTTGTAAAACAACAAAGTCAGTTGAGCAAGCTGCAGGAA GTTTCTCTGAGGAACTGCGCAGTAAACGGTGCTGGTGACAAACGAGGAATTGCCCAAGTG TGTCCTAATATT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 59-189, gnl|bosTau2|chr28 (3003424-3003554) | |
| 59-189, gnl|canFam2|chr4 (7549838-7549626) | |
| 59-189, gnl|echTel1|scaffold_214471 (6923-6702) | |
| 59-189, gnl|hg17|chr1 (231869314-231869539) | |
| 59-189, gnl|Hg17|chr1 (231869377-231869507) | |
| 59-189, gnl|mm7|chr13 (13395333-13395156) | |
| 59-189, gnl|Mm7|chr13 (13395292-13395162) | |
| 59-189, gnl|oryCun1|scaffold_117936 (6643-6834) | |
| 59-189, gnl|rheMac2|chr1 (221630734-221630526) | |
| 59-189, gnl|rn3|chr17 (59504499-59504673) | |
| 271-458, gnl|bosTau2|chr28 (3015120-3015307) | |
| 271-458, gnl|canFam2|chr4 (7505556-7505280) | |
| 271-458, gnl|danRer3|chr11 (42658091-42658380) | |
| 271-458, gnl|dasNov1|scaffold_173901 (1113-828) | |
| 271-458, gnl|echTel1|scaffold_265700 (3299-3567) | |
| 271-458, gnl|hg17|chr1 (231903787-231904071) | |
| 271-458, gnl|Hg17|chr1 (231903787-231903974) | |
| 271-458, gnl|loxAfr1|scaffold_86318 (1922-2192) | |
| 271-458, gnl|mm7|chr13 (13385646-13385385) | |
| 271-458, gnl|Mm7|chr13 (13385644-13385457) | |
| 271-458, gnl|monDom2|scaffold_13 (50300874-50300619) | |
| 271-458, gnl|oryCun1|scaffold_90600 (5980-6268) | |
| 271-458, gnl|panTro1|chr1 (215735534-215735818) | |
| 271-458, gnl|rheMac2|chr1 (221595769-221595485) | |
| 271-458, gnl|rn3|chr17 (59520947-59521205) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 59-189, gnl|bosTau2|chr28 (3003424-3003554) | |
| 59-189, gnl|canFam2|chr4 (7549838-7549626) | |
| 59-189, gnl|echTel1|scaffold_214471 (6923-6702) | |
| 59-189, gnl|hg17|chr1 (231869314-231869539) | |
| 59-189, gnl|Hg17|chr1 (231869377-231869507) | |
| 59-189, gnl|mm7|chr13 (13395333-13395156) | |
| 59-189, gnl|Mm7|chr13 (13395292-13395162) | |
| 59-189, gnl|oryCun1|scaffold_117936 (6643-6834) | |
| 59-189, gnl|rheMac2|chr1 (221630734-221630526) | |
| 59-189, gnl|rn3|chr17 (59504499-59504673) | |
| 271-458, gnl|bosTau2|chr28 (3015120-3015307) | |
| 271-458, gnl|canFam2|chr4 (7505556-7505280) | |
| 271-458, gnl|danRer3|chr11 (42658091-42658380) | |
| 271-458, gnl|dasNov1|scaffold_173901 (1113-828) | |
| 271-458, gnl|echTel1|scaffold_265700 (3299-3567) | |
| 271-458, gnl|hg17|chr1 (231903787-231904071) | |
| 271-458, gnl|Hg17|chr1 (231903787-231903974) | |
| 271-458, gnl|loxAfr1|scaffold_86318 (1922-2192) | |
| 271-458, gnl|mm7|chr13 (13385646-13385385) | |
| 271-458, gnl|Mm7|chr13 (13385644-13385457) | |
| 271-458, gnl|monDom2|scaffold_13 (50300874-50300619) | |
| 271-458, gnl|oryCun1|scaffold_90600 (5980-6268) | |
| 271-458, gnl|panTro1|chr1 (215735534-215735818) | |
| 271-458, gnl|rheMac2|chr1 (221595769-221595485) | |
| 271-458, gnl|rn3|chr17 (59520947-59521205) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pgl (0.118483) |