Non-Coding RNA Search

Ss1.1-rpgl33_j6.5

Sequence:


               
               GATGAGTTGGAACTTACTGATTTTTACTAAGTAAGGAGAAGTTTTCTTTTTTTTTTTTCT
GATAAGTAATTGTAAGCTTGTTAAAACAAGCTTTTGATGTTATTGTTAGAAATGAATTAT
CAGACCAGAAAGTAATTGCAAATGTGCATCATGATAATTTCCTTTTTATTAGAGAAGTTG
GATAAATTTTAACAAGACATTCAATTTCCGCTACAGGTTACCAGGGACAGATATAAGAAC
AGTCAAGCATTTTGTGAATACTGCCCTGCAGTCTCAAGTTATGGATGTAGTTTAGAAAGT
GATGATCTCATTGGAACAAGTCATTGTAAATCAGTGTGACTGTAAGGATTTAGAAATGAA
AAGCATGACTTCTCTTATGAAAATTCACTCCTTGTTTTTCAAGAGGGGAAATAAATTTTT
CTTTAAATCCAAATATATTAAAAACATGTTCCCTAGTTTGTTTTATTAATTATGTCATAT
GCAAACAGTTGTCCTGCATATAAAAGTATATGGTTATTTCTCTTTGGTTTGTAATTATTT
GGCACAATTTTATCATAAGTAACTCAGATTTGTTGTTAAAAAAAATTCAACAAGATGAGA
AATCATTTTATCAAAGGGCTGATTTGAGAACACTGTAGCTGAAATATGATCCCCCCAAGT
TTACTCGTGAGTCAAAATGTAAAATATAACCTCACATAAGAACCATGGCTTTGAATTACT
CACCACCTGTCACAAGTTTCAGTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GATGAGTTGGAACTTACTGATTTTTACTAAGTAAGGAGAAGTTTTCTTTTTTTTTTTTCT
GATAAGTAATTGTAAGCTTGTTAAAACAAGCTTTTGATGTTATTGTTAGAAATGAATTAT
CAGACCAGAAAGTAATTGCAAATGTGCATCATGATAATTTCCTTTTTATTAGAGAAGTTG
GATAAATTTTAACAAGACATTCAATTTCCGCTACAGGTTACCAGGGACAGATATAAGAAC
AGTCAAGCATTTTGTGAATACTGCCCTGCAGTCTCAAGTTATGGATGTAGTTTAGAAAGT
GATGATCTCATTGGAACAAGTCATTGTAAATCAGTGTGACTGTAAGGATTTAGAAATGAA
AAGCATGACTTCTCTTATGAAAATTCACTCCTTGTTTTTCAAGAGGGGAAATAAATTTTT
CTTTAAATCCAAATATATTAAAAACATGTTCCCTAGTTTGTTTTATTAATTATGTCATAT
GCAAACAGTTGTCCTGCATATAAAAGTATATGGTTATTTCTCTTTGGTTTGTAATTATTT
GGCACAATTTTATCATAAGTAACTCAGATTTGTTGTTAAAAAAAATTCAACAAGATGAGA
AATCATTTTATCAAAGGGCTGATTTGAGAACACTGTAGCTGAAATATGATCCCCCCAAGT
TTACTCGTGAGTCAAAATGTAAAATATAACCTCACATAAGAACCATGGCTTTGAATTACT
CACCACCTGTCACAAGTTTCAGTG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-744, gnl|bosTau2|chr24 (12103888-12104633)
               

               
               1-744, gnl|Hg17|chr18 (39104292-39103541)
               

               
               1-744, gnl|Mm7|chr18 (31831871-31831106)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-744, gnl|bosTau2|chr24 (12103888-12104633)
               

               
               1-744, gnl|Hg17|chr18 (39104292-39103541)
               

               
               1-744, gnl|Mm7|chr18 (31831871-31831106)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               pgl (0.118483)
               

               
               ecc (0.115035)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pgl (0.118483)
               

               
               ecc (0.115035)

	1-744, gnl\|bosTau2\|chr24 (12103888-12104633)
	1-744, gnl\|Hg17\|chr18 (39104292-39103541)
	1-744, gnl\|Mm7\|chr18 (31831871-31831106)