Non-Coding RNA Search

Ss1.1-rpgl35_e15.5

Sequence:


               
               AAAAAAAAAAAAGGAAAAAAAAGGAAAAAAAAAAAAAAAAAAAACAAACAAAAAAAAAAC
CAACCTCCTTGTAGTTTCTTATAGGAAAGAAAGAAAAACCCCAACTTTTAGCACTGATAC
TACATATTGCTCTGTTAAAGAATTTTCTCTGCCAAAAAAAAGAAAAAAGAAAAAAAAAAA
CAACAAAAAAAACGCTTAAAGCTGGAGTTTGAGATTCTGCTTTCAGATGCTGTCTTTTTA
TTAGTGAGTGATGATGGTTTGCTAATAATCAGTAGGTATAATTTTTGTAATCCCATCAAG
TGGCTCTCTATGTTTCTGCTCTCTCGTGACTGTGTTCATGTCTAACTGTTGTACCTTAAA
GCCGAAATCCGTAACTATGCATACTGTAACCAAGGTATTGGGCCTACAGAATTGTTCGTT
GTATAAAAAAAATTTTAAATGTTGTTGCGAACTAACGAGTTACACCATTTTTAAAATTTC
TTTCTCTCCTCCCTTCCTTTGTTTTTTTTTTTGTTTTTTTTTTCTTTGCCCACAAATGGT
ATTATAATGCTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAAAAAAAAAAGGAAAAAAAAGGAAAAAAAAAAAAAAAAAAAACAAACAAAAAAAAAAC
CAACCTCCTTGTAGTTTCTTATAGGAAAGAAAGAAAAACCCCAACTTTTAGCACTGATAC
TACATATTGCTCTGTTAAAGAATTTTCTCTGCCAAAAAAAAGAAAAAAGAAAAAAAAAAA
CAACAAAAAAAACGCTTAAAGCTGGAGTTTGAGATTCTGCTTTCAGATGCTGTCTTTTTA
TTAGTGAGTGATGATGGTTTGCTAATAATCAGTAGGTATAATTTTTGTAATCCCATCAAG
TGGCTCTCTATGTTTCTGCTCTCTCGTGACTGTGTTCATGTCTAACTGTTGTACCTTAAA
GCCGAAATCCGTAACTATGCATACTGTAACCAAGGTATTGGGCCTACAGAATTGTTCGTT
GTATAAAAAAAATTTTAAATGTTGTTGCGAACTAACGAGTTACACCATTTTTAAAATTTC
TTTCTCTCCTCCCTTCCTTTGTTTTTTTTTTTGTTTTTTTTTTCTTTGCCCACAAATGGT
ATTATAATGCTT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               33-505, gnl|bosTau2|chr25 (22587666-22587206)
               

               
               33-505, gnl|Hg17|chr16 (24743592-24744029)
               

               
               33-505, gnl|Mm7|chr7 (119296557-119296990)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               33-505, gnl|bosTau2|chr25 (22587666-22587206)
               

               
               33-505, gnl|Hg17|chr16 (24743592-24744029)
               

               
               33-505, gnl|Mm7|chr7 (119296557-119296990)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               fcc (0.197785)
               

               
               liv (0.146284)
               

               
               pgl (0.118483)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fcc (0.197785)
               

               
               liv (0.146284)
               

               
               pgl (0.118483)

	33-505, gnl\|bosTau2\|chr25 (22587666-22587206)
	33-505, gnl\|Hg17\|chr16 (24743592-24744029)
	33-505, gnl\|Mm7\|chr7 (119296557-119296990)