Non-Coding RNA Search

Ss1.1-rpigca0_000361.5

Sequence:


               
               CAAGGTCCTTGCTCCAGCCGCATATTTCGCCATCTGCCAGCAGGACAGTTGCCACCAGGA
GCAAGTGTGTGAGGCAGTTGCCTCTTATGCCCACCTCTGTCGGACCAAGGGTGTGTGTGT
CGACTGGAGGACCCCTGATTTCTGTGCCGTATCGTGCCCACCATCCCTGGTCTACAACCA
CTGTGAGCACGGCTGCCCGCGGCACTGTGAGGGCAATTCGAGCTCCTGTGGGGACCATCC
CTCTGAAGGCTGCTTCTGCCCCCCGCACCAAGTGATGCTGGGAAGCAGCTGTGTCCCCGA
GGAGGCCTGCACCCAGTGTGTTGACGATGATGGGATCCGGCACCAGTTCCTGGAAACCTG
GGTCCCGGACCACCAGCCCTGCCAGGTCTGCACCTGCCTCAGTGGTCGGAGGGTCAACTG
CACATTGCAGCCCTGCCCCACGGCTAGAGCTCCCGCTTGCGGCCTGTGTGAGGTGGCCCG
TCTCCGCCAGGGAGCTCACCAGTGCTGCCCCGAGTACGAGTGTGTGTGTGACCTGGTGAG
CTGTGACCTGCCCCCGGTGCCGCACTGCGAAGGTGGCCTCCAGCCGACACTGACCAATCC
TGGCGAGTGCAGACCCAACTTCACCTGCGCCTGCAGGAAGGAGGAATGCCCGAGGGGCCC
TTGCCCTCCTGCCCCCCGCATCGAACGCCAGCCCTCCGGAAGACCCAGTGCTGTGACGAG
TATTGAGTGTGCTTGCAACTGTGTCAATACCACCCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAAGGTCCTTGCTCCAGCCGCATATTTCGCCATCTGCCAGCAGGACAGTTGCCACCAGGA
GCAAGTGTGTGAGGCAGTTGCCTCTTATGCCCACCTCTGTCGGACCAAGGGTGTGTGTGT
CGACTGGAGGACCCCTGATTTCTGTGCCGTATCGTGCCCACCATCCCTGGTCTACAACCA
CTGTGAGCACGGCTGCCCGCGGCACTGTGAGGGCAATTCGAGCTCCTGTGGGGACCATCC
CTCTGAAGGCTGCTTCTGCCCCCCGCACCAAGTGATGCTGGGAAGCAGCTGTGTCCCCGA
GGAGGCCTGCACCCAGTGTGTTGACGATGATGGGATCCGGCACCAGTTCCTGGAAACCTG
GGTCCCGGACCACCAGCCCTGCCAGGTCTGCACCTGCCTCAGTGGTCGGAGGGTCAACTG
CACATTGCAGCCCTGCCCCACGGCTAGAGCTCCCGCTTGCGGCCTGTGTGAGGTGGCCCG
TCTCCGCCAGGGAGCTCACCAGTGCTGCCCCGAGTACGAGTGTGTGTGTGACCTGGTGAG
CTGTGACCTGCCCCCGGTGCCGCACTGCGAAGGTGGCCTCCAGCCGACACTGACCAATCC
TGGCGAGTGCAGACCCAACTTCACCTGCGCCTGCAGGAAGGAGGAATGCCCGAGGGGCCC
TTGCCCTCCTGCCCCCCGCATCGAACGCCAGCCCTCCGGAAGACCCAGTGCTGTGACGAG
TATTGAGTGTGCTTGCAACTGTGTCAATACCACCCT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-146, gnl|bosTau2|chr5 (61501193-61501048)
               

               
               1-146, gnl|Hg17|chr12 (5973434-5973289)
               

               
               1-146, gnl|Mm7|chr6 (125679991-125680136)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-146, gnl|bosTau2|chr5 (61501193-61501048)
               

               
               1-146, gnl|Hg17|chr12 (5973434-5973289)
               

               
               1-146, gnl|Mm7|chr6 (125679991-125680136)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               clu (0.119646)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               clu (0.119646)

	1-146, gnl\|bosTau2\|chr5 (61501193-61501048)
	1-146, gnl\|Hg17\|chr12 (5973434-5973289)
	1-146, gnl\|Mm7\|chr6 (125679991-125680136)