Non-Coding RNA Search

Ss1.1-rpigca0_000513.5

Sequence:


               
               TAAAATCTCTTCGTGGCCAAAACTGATATGAAAAGCCTCAGCTTGGGAAGATAGGTGGGT
TTTTTTTTTTCCTTTCTAATTAAAAAATCTAAGTATTTTGACCCTTCAATTTAGAGGAGT
GCTAAAGTTGGATAAGAAGGTTTAAAAGTTGGGTAAGAGGGTTTATATTAAATACTTTCA
GTGCTCAAAATGCAATCACTGTGTTGTATATAATGATTCATTGGTTGACCTTTCATAATA
ATTGACTCTAAGGCTATAAGAAAGCAGCAGAAAGATTAAATCTTGAATGAGGTCTGAGGG
AAAACGGCCACTGCAGATGTATTGATTTTTTTTAGAGGAATAATGAAATTTTGCCTAGAA
TGCACAATTGATTTTATGGACGATATAGCATGTTGGGTTTTTTTATGTGCAGAAGATCAA
AGCTACTTGAAAGGATGGCCTACAATTTGCCATTAAGCCACAAATGAAGATCGCATCTCA
TATCTCAGCAGAGTAGCTGTAGATTAGGGAAGAGGGTGGGAAGATAGGAGGGGGGTTGTG
ACGATTTAGTGAGACCTTGATAGAGAACTTTATAAGCTTCTTTTTCTTCAATAAAGTCTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAAAATCTCTTCGTGGCCAAAACTGATATGAAAAGCCTCAGCTTGGGAAGATAGGTGGGT
TTTTTTTTTTCCTTTCTAATTAAAAAATCTAAGTATTTTGACCCTTCAATTTAGAGGAGT
GCTAAAGTTGGATAAGAAGGTTTAAAAGTTGGGTAAGAGGGTTTATATTAAATACTTTCA
GTGCTCAAAATGCAATCACTGTGTTGTATATAATGATTCATTGGTTGACCTTTCATAATA
ATTGACTCTAAGGCTATAAGAAAGCAGCAGAAAGATTAAATCTTGAATGAGGTCTGAGGG
AAAACGGCCACTGCAGATGTATTGATTTTTTTTAGAGGAATAATGAAATTTTGCCTAGAA
TGCACAATTGATTTTATGGACGATATAGCATGTTGGGTTTTTTTATGTGCAGAAGATCAA
AGCTACTTGAAAGGATGGCCTACAATTTGCCATTAAGCCACAAATGAAGATCGCATCTCA
TATCTCAGCAGAGTAGCTGTAGATTAGGGAAGAGGGTGGGAAGATAGGAGGGGGGTTGTG
ACGATTTAGTGAGACCTTGATAGAGAACTTTATAAGCTTCTTTTTCTTCAATAAAGTCTG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               144-595, gnl|bosTau2|chr2 (83916121-83915654)
               

               
               144-595, gnl|Hg17|chr11 (101607830-101608289)
               

               
               144-595, gnl|Mm7|chr9 (7956692-7956252)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               144-595, gnl|bosTau2|chr2 (83916121-83915654)
               

               
               144-595, gnl|Hg17|chr11 (101607830-101608289)
               

               
               144-595, gnl|Mm7|chr9 (7956692-7956252)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               eru (0.240096)
               

               
               clu (0.119646)
               

               
               ldo (0.0970026)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eru (0.240096)
               

               
               clu (0.119646)
               

               
               ldo (0.0970026)

	144-595, gnl\|bosTau2\|chr2 (83916121-83915654)
	144-595, gnl\|Hg17\|chr11 (101607830-101608289)
	144-595, gnl\|Mm7\|chr9 (7956692-7956252)