Non-Coding RNA Search

Ss1.1-rpigca0_004012.5

Sequence:


               
               GTCTTTGAAGGATTTTTAACTAGTTTGTATCAGCCCAATTCATACTTAACCCAAGAGTCT
CTAGACTGTTATTCTTCTGACATGTATTTGCTGTTTTGAGTAATTGTCAGCTTACAATGT
AGTGGTAGTGTTTTCCATTTAAATCAGCTATCAAATCAATACACTATATTTTTCTTCTTT
TAGCCCTGGTTTCCTGAGGTTCGTGAGGGTTTTATGTGGCATGTCTTCAGATGAGAGGAA
AGCATTCCTGCAGTTTACCACTGGTTGTTCAACTCTACCCCCAGGTGGACTAGCTAACTT
GCATCCGAGGCTTACAGTTGTACGCAAGGTACAAACTCTAGCTAATGAGAAATCCAAATG
GAATTTAGTTATTTAAGGATTGAAAGAAATGCATATTTAAAATCATTGTCTTCTGTTATT
TTCAATTCTCTTTCTGTAGGTTGATGCTACTGATGCAAGCTACCCATCAGTGAATACATG
TGTGCATTATCTAAAGTTGCCAGAATATTCTTCGGAGGAGATCATGAGAGAGCGCCTGCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTCTTTGAAGGATTTTTAACTAGTTTGTATCAGCCCAATTCATACTTAACCCAAGAGTCT
CTAGACTGTTATTCTTCTGACATGTATTTGCTGTTTTGAGTAATTGTCAGCTTACAATGT
AGTGGTAGTGTTTTCCATTTAAATCAGCTATCAAATCAATACACTATATTTTTCTTCTTT
TAGCCCTGGTTTCCTGAGGTTCGTGAGGGTTTTATGTGGCATGTCTTCAGATGAGAGGAA
AGCATTCCTGCAGTTTACCACTGGTTGTTCAACTCTACCCCCAGGTGGACTAGCTAACTT
GCATCCGAGGCTTACAGTTGTACGCAAGGTACAAACTCTAGCTAATGAGAAATCCAAATG
GAATTTAGTTATTTAAGGATTGAAAGAAATGCATATTTAAAATCATTGTCTTCTGTTATT
TTCAATTCTCTTTCTGTAGGTTGATGCTACTGATGCAAGCTACCCATCAGTGAATACATG
TGTGCATTATCTAAAGTTGCCAGAATATTCTTCGGAGGAGATCATGAGAGAGCGCCTGCT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|59808600|gb|AAH89310.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|59808600|gb|AAH89310.1|

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-540, gnl|bosTau2|chr1 (59505732-59505186)
               

               
               1-540, gnl|Hg17|chr14 (30640778-30639924)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-540, gnl|bosTau2|chr1 (59505732-59505186)
               

               
               1-540, gnl|Hg17|chr14 (30640778-30639924)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               clu (0.837521)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               clu (0.837521)

	1-540, gnl\|bosTau2\|chr1 (59505732-59505186)
	1-540, gnl\|Hg17\|chr14 (30640778-30639924)