Ss1.1-rpigca0_004033.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGATTCGGCAGAGGGGGATATGGGAGCAATCACCATGGACCAGAAGTCTCTCTGGGCAGG TTTAGTGGTCTTGCTGCTGCTTCAGGAAGGATCTGCCTACAAACTGGTTTGCTACTTTAC CAGCTGGTCACAGGACAGGCAGGAACCGGGGAAGTTCACTCTTGAGAGCGCTGACCCGTT CCTATGTTCTCACCTCATCTACTCATTCGCCAGCATCAGTGACAACAAGGTCGTCATCAA GGACAAGAATGATGCGATGCTTTACCAGACCATCAAGAGTCTGAAAACCAAGAACCCCAA ACTGAAAATTCTCTTTTCCATTGGAGGATATCTCTTTGGTTCCAAAGGAGAACTGGATTT CATCAACCTCCTGTCTTTTGACTTCCATGGGTCTTGGGAAAAGCCCCTCGTCACTGGCCA CAACAGCCCTCTGAGAAAGGGGCAGCTAGACAGAGGAACAACCTCCTACTACAATGTGGA ATATGCTGTGGGATACTGGCTAAATAAGGGGATGCCTGCAGAGAAGGTGGTCATGGGCAT CCCAACATATGGACGTTCCTTTACCCTGGCCTCTGCAGAAACTGCCGT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGATTCGGCAGAGGGGGATATGGGAGCAATCACCATGGACCAGAAGTCTCTCTGGGCAGG TTTAGTGGTCTTGCTGCTGCTTCAGGAAGGATCTGCCTACAAACTGGTTTGCTACTTTAC CAGCTGGTCACAGGACAGGCAGGAACCGGGGAAGTTCACTCTTGAGAGCGCTGACCCGTT CCTATGTTCTCACCTCATCTACTCATTCGCCAGCATCAGTGACAACAAGGTCGTCATCAA GGACAAGAATGATGCGATGCTTTACCAGACCATCAAGAGTCTGAAAACCAAGAACCCCAA ACTGAAAATTCTCTTTTCCATTGGAGGATATCTCTTTGGTTCCAAAGGAGAACTGGATTT CATCAACCTCCTGTCTTTTGACTTCCATGGGTCTTGGGAAAAGCCCCTCGTCACTGGCCA CAACAGCCCTCTGAGAAAGGGGCAGCTAGACAGAGGAACAACCTCCTACTACAATGTGGA ATATGCTGTGGGATACTGGCTAAATAAGGGGATGCCTGCAGAGAAGGTGGTCATGGGCAT CCCAACATATGGACGTTCCTTTACCCTGGCCTCTGCAGAAACTGCCGT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
| 88-292, gnl|bosTau2|chr3 (28481126-28480922) | |
| 88-292, gnl|canFam2|chr6 (43825064-43824833) | |
| 88-292, gnl|danRer3|chrNA (30597792-30598011) | |
| 88-292, gnl|dasNov1|scaffold_13345 (91225-90991) | |
| 88-292, gnl|echTel1|scaffold_280312 (47889-47653) | |
| 88-292, gnl|fr1|chrUn (207165913-207165672) | |
| 88-292, gnl|hg17|chr1 (111485397-111485633) | |
| 88-292, gnl|Hg17|chr1 (111485404-111485608) | |
| 88-292, gnl|loxAfr1|scaffold_5137 (82316-82080) | |
| 88-292, gnl|mm7|chr1 (134073273-134073522) | |
| 88-292, gnl|Mm7|chr1 (134073280-134073487) | |
| 88-292, gnl|monDom2|scaffold_0 (4598907-4598673) | |
| 88-292, gnl|oryCun1|scaffold_207810 (82154-81918) | |
| 88-292, gnl|panTro1|chr1 (110801300-110801064) | |
| 88-292, gnl|rheMac2|chr1 (114268676-114268912) | |
| 88-292, gnl|rn3|chr13 (47155083-47155296) | |
| 88-292, gnl|tetNig1|chrUn_random (126517762-126517539) | |
| 88-292, gnl|xenTro1|scaffold_19 (1170412-1170195) | |
| 348-479, gnl|bosTau2|chr3 (28475199-28475068) | |
| 348-479, gnl|canFam2|chr6 (43818317-43818214) | |
| 348-479, gnl|danRer3|chrNA (30604451-30604566) | |
| 348-479, gnl|dasNov1|scaffold_82330 (1241-1347) | |
| 348-479, gnl|echTel1|scaffold_280312 (43978-43843) | |
| 348-479, gnl|fr1|chrUn (207165070-207164968) | |
| 348-479, gnl|hg17|chr1 (111490657-111490792) | |
| 348-479, gnl|Hg17|chr1 (111490687-111490818) | |
| 348-479, gnl|loxAfr1|scaffold_5137 (78017-77882) | |
| 348-479, gnl|mm7|chr1 (134077635-134077753) | |
| 348-479, gnl|Mm7|chr1 (134036346-134036471) | |
| 348-479, gnl|monDom2|scaffold_0 (4592262-4592120) | |
| 348-479, gnl|oryCun1|scaffold_201653 (98865-98766) | |
| 348-479, gnl|panTro1|chr1 (110796659-110796524) | |
| 348-479, gnl|rheMac2|chr1 (114273213-114273348) | |
| 348-479, gnl|rn3|chr13 (47159447-47159564) | |
| 348-479, gnl|tetNig1|chrUn_random (126516681-126516582) | |
| 348-479, gnl|xenTro1|scaffold_19 (1169043-1168914) |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 88-292, gnl|bosTau2|chr3 (28481126-28480922) | |
| 88-292, gnl|canFam2|chr6 (43825064-43824833) | |
| 88-292, gnl|danRer3|chrNA (30597792-30598011) | |
| 88-292, gnl|dasNov1|scaffold_13345 (91225-90991) | |
| 88-292, gnl|echTel1|scaffold_280312 (47889-47653) | |
| 88-292, gnl|fr1|chrUn (207165913-207165672) | |
| 88-292, gnl|hg17|chr1 (111485397-111485633) | |
| 88-292, gnl|Hg17|chr1 (111485404-111485608) | |
| 88-292, gnl|loxAfr1|scaffold_5137 (82316-82080) | |
| 88-292, gnl|mm7|chr1 (134073273-134073522) | |
| 88-292, gnl|Mm7|chr1 (134073280-134073487) | |
| 88-292, gnl|monDom2|scaffold_0 (4598907-4598673) | |
| 88-292, gnl|oryCun1|scaffold_207810 (82154-81918) | |
| 88-292, gnl|panTro1|chr1 (110801300-110801064) | |
| 88-292, gnl|rheMac2|chr1 (114268676-114268912) | |
| 88-292, gnl|rn3|chr13 (47155083-47155296) | |
| 88-292, gnl|tetNig1|chrUn_random (126517762-126517539) | |
| 88-292, gnl|xenTro1|scaffold_19 (1170412-1170195) | |
| 348-479, gnl|bosTau2|chr3 (28475199-28475068) | |
| 348-479, gnl|canFam2|chr6 (43818317-43818214) | |
| 348-479, gnl|danRer3|chrNA (30604451-30604566) | |
| 348-479, gnl|dasNov1|scaffold_82330 (1241-1347) | |
| 348-479, gnl|echTel1|scaffold_280312 (43978-43843) | |
| 348-479, gnl|fr1|chrUn (207165070-207164968) | |
| 348-479, gnl|hg17|chr1 (111490657-111490792) | |
| 348-479, gnl|Hg17|chr1 (111490687-111490818) | |
| 348-479, gnl|loxAfr1|scaffold_5137 (78017-77882) | |
| 348-479, gnl|mm7|chr1 (134077635-134077753) | |
| 348-479, gnl|Mm7|chr1 (134036346-134036471) | |
| 348-479, gnl|monDom2|scaffold_0 (4592262-4592120) | |
| 348-479, gnl|oryCun1|scaffold_201653 (98865-98766) | |
| 348-479, gnl|panTro1|chr1 (110796659-110796524) | |
| 348-479, gnl|rheMac2|chr1 (114273213-114273348) | |
| 348-479, gnl|rn3|chr13 (47159447-47159564) | |
| 348-479, gnl|tetNig1|chrUn_random (126516681-126516582) | |
| 348-479, gnl|xenTro1|scaffold_19 (1169043-1168914) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| clu (0.358938) |