Non-Coding RNA Search

Ss1.1-rpigca0_005578.5

Sequence:


               
               GCCGACCGCTTCCTTGACTTCTGGAGGAAGACGGGGAACCAGCACTTCGGGTACTTGTAT
GGACGGTATACGGAGCACAAAGACATTCCTCTTGGTATCAGGGCTGAAGTAGCTGCGATT
TATGAACCTCCTCAGGTAGACGCCCGCAGGAGTTGCAGTTTACGGGCCTCTGGGTTGCTT
TGTTTCGAAGGCTGTGGGGGATGCGCTTTTCAGACCGCTTGTTGCTTCTCTTCCTGTGTC
ATCAGCCCAGTCTCTTCTCTGCACACACACGCACCCCTGCGCACCCCCACACAGACACAC
ACAGACACACCCACGGTGCTGATTTGCTGAATTGTTGGAGAGCAAGGAGATCACGGCCCC
TCCGTGCTTCGGGGAATATCTCTGGAGCACAAGGACAGTTTAGAAAACACGTACACCCGT
CAGCTTAAGTACGCCAAGCATCGGTAGCTGTTTCACTCGGACCTGCCATCTGATCCCACC
GCTGTCACTCGCCCCCACCATGTCCCGCAGCTGCGCTCCCTCCCGATCCCGCTTCTCTGC
CTCGCGCACAGTCAGCTCTCCTGGCAATGAGGGCCTGCAAGTCACAGCTTTTTATCTTAC
ATCTTAGAATTACAGTAGCAAGATTCCCACCGGTAGAGGACTGAAAACATCACGATTGTT
TGGGGTGTTCCCGTCGTGGCTCAGTGGAAACGAACCGTGAGGACGCGGGTTCGATCCCTG
GCCTCGCTCAGCGGGGTAAAGATCCAGCATTGCTGTGAGCTGTGGTGTGGGTCGCAGACG
AAGCTCGGATCTGGTGTTGCTGTGGCTGTGGCACAGGCCTGCAGCTGTAGCTCCTATTCG
ACCCCTAGCCTGGGAACATCCACA------------------------------------
AAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCGACCGCTTCCTTGACTTCTGGAGGAAGACGGGGAACCAGCACTTCGGGTACTTGTAT
GGACGGTATACGGAGCACAAAGACATTCCTCTTGGTATCAGGGCTGAAGTAGCTGCGATT
TATGAACCTCCTCAGGTAGACGCCCGCAGGAGTTGCAGTTTACGGGCCTCTGGGTTGCTT
TGTTTCGAAGGCTGTGGGGGATGCGCTTTTCAGACCGCTTGTTGCTTCTCTTCCTGTGTC
ATCAGCCCAGTCTCTTCTCTGCACACACACGCACCCCTGCGCACCCCCACACAGACACAC
ACAGACACACCCACGGTGCTGATTTGCTGAATTGTTGGAGAGCAAGGAGATCACGGCCCC
TCCGTGCTTCGGGGAATATCTCTGGAGCACAAGGACAGTTTAGAAAACACGTACACCCGT
CAGCTTAAGTACGCCAAGCATCGGTAGCTGTTTCACTCGGACCTGCCATCTGATCCCACC
GCTGTCACTCGCCCCCACCATGTCCCGCAGCTGCGCTCCCTCCCGATCCCGCTTCTCTGC
CTCGCGCACAGTCAGCTCTCCTGGCAATGAGGGCCTGCAAGTCACAGCTTTTTATCTTAC
ATCTTAGAATTACAGTAGCAAGATTCCCACCGGTAGAGGACTGAAAACATCACGATTGTT
TGGGGTGTTCCCGTCGTGGCTCAGTGGAAACGAACCGTGAGGACGCGGGTTCGATCCCTG
GCCTCGCTCAGCGGGGTAAAGATCCAGCATTGCTGTGAGCTGTGGTGTGGGTCGCAGACG
AAGCTCGGATCTGGTGTTGCTGTGGCTGTGGCACAGGCCTGCAGCTGTAGCTCCTATTCG
ACCCCTAGCCTGGGAACATCCACA------------------------------------
AAAAAAAAAAAA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               1-253, gnl|bosTau2|chr19 (45223809-45223558)
               

               
               1-253, gnl|Hg17|chr17 (77182148-77181896)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-253, gnl|bosTau2|chr19 (45223809-45223558)
               

               
               1-253, gnl|Hg17|chr17 (77182148-77181896)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               clu (0.239292)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               clu (0.239292)

	1-253, gnl\|bosTau2\|chr19 (45223809-45223558)
	1-253, gnl\|Hg17\|chr17 (77182148-77181896)