Ss1.1-rpigca0_006321.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCCTTCCTGGCCCACGCCCCCACCTGCCCTGCGTGAGGCCTCGGAGCTCCTGCGGGAGCT CTGCCGGAAGAACATGGTGTGGAAGTACTGCCGGAGCATCAGCCCCGAGTGGAAGCAGCA GCTGCAGCAAAAAGCCGTGGCTAGTGAGATCTTCAAAGGCAAGAAAGACAATTACCCCCA GAGTGTCCCCAGGCTCTTCATCAGCACACGGCTTGGTGCGGATGAGATCAGCCCCAAGGT GCTGCAGGCCCTGGGCTCTGAGCCCATCCAGTATGCTGTGCCCGTTGTGAAATATGACCG CAAAGGCTACAAGCCACGCTCCCGGCAGCTGCTGCTGACACCCAACGCCGTGGTCATCGT GGAGGATGCCAAAGTCAAGCAGAGGATTGATTATGCCAACCTGACCGGAATATCTGTCAG CAGCCTGAGTGACAGCCTCTTTGTGCTGCACGTGCAGCGTGAGGACAATAAGCAGAAGGG GGACGTGGTGCTGCAGAGCGACCACGTGATCGAGACGCTGACCAAGACGGCCCTCAGCGC CGACCGCGTGAGCAACATCAACAT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCCTTCCTGGCCCACGCCCCCACCTGCCCTGCGTGAGGCCTCGGAGCTCCTGCGGGAGCT CTGCCGGAAGAACATGGTGTGGAAGTACTGCCGGAGCATCAGCCCCGAGTGGAAGCAGCA GCTGCAGCAAAAAGCCGTGGCTAGTGAGATCTTCAAAGGCAAGAAAGACAATTACCCCCA GAGTGTCCCCAGGCTCTTCATCAGCACACGGCTTGGTGCGGATGAGATCAGCCCCAAGGT GCTGCAGGCCCTGGGCTCTGAGCCCATCCAGTATGCTGTGCCCGTTGTGAAATATGACCG CAAAGGCTACAAGCCACGCTCCCGGCAGCTGCTGCTGACACCCAACGCCGTGGTCATCGT GGAGGATGCCAAAGTCAAGCAGAGGATTGATTATGCCAACCTGACCGGAATATCTGTCAG CAGCCTGAGTGACAGCCTCTTTGTGCTGCACGTGCAGCGTGAGGACAATAAGCAGAAGGG GGACGTGGTGCTGCAGAGCGACCACGTGATCGAGACGCTGACCAAGACGGCCCTCAGCGC CGACCGCGTGAGCAACATCAACAT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 19 entry(ies) | More info |
| Aligned organism(s): 19 entry(ies) | Help | Less info |
| 268-408, gnl|bosTau2|chr19 (17114810-17114670) | |
| 268-408, gnl|canFam2|chr9 (48962504-48962611) | |
| 268-408, gnl|danRer3|chr14 (38482557-38482663) | |
| 268-408, gnl|dasNov1|scaffold_7683 (8322-8429) | |
| 268-408, gnl|echTel1|scaffold_314452 (4455-4348) | |
| 268-408, gnl|fr1|chrUn (98529255-98529141) | |
| 268-408, gnl|galGal2|chr15 (6752110-6751995) | |
| 268-408, gnl|hg17|chr17 (1318027-1318134) | |
| 268-408, gnl|Hg17|chr17 (1318171-1318031) | |
| 268-408, gnl|loxAfr1|scaffold_5401 (73834-73727) | |
| 268-408, gnl|mm7|chr11 (75753303-75753196) | |
| 268-408, gnl|Mm7|chr11 (75753157-75753297) | |
| 268-408, gnl|monDom2|scaffold_86 (2613439-2613546) | |
| 268-408, gnl|oryCun1|scaffold_179001 (82741-82634) | |
| 268-408, gnl|panTro1|chr19_random (4203859-4203966) | |
| 268-408, gnl|rheMac2|chr16 (1261021-1261128) | |
| 268-408, gnl|rn3|chr10 (63019267-63019160) | |
| 268-408, gnl|tetNig1|chr7 (5361241-5361344) | |
| 268-408, gnl|xenTro1|scaffold_1149 (149533-149426) |
| Aligned organism(s): 19 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 268-408, gnl|bosTau2|chr19 (17114810-17114670) | |
| 268-408, gnl|canFam2|chr9 (48962504-48962611) | |
| 268-408, gnl|danRer3|chr14 (38482557-38482663) | |
| 268-408, gnl|dasNov1|scaffold_7683 (8322-8429) | |
| 268-408, gnl|echTel1|scaffold_314452 (4455-4348) | |
| 268-408, gnl|fr1|chrUn (98529255-98529141) | |
| 268-408, gnl|galGal2|chr15 (6752110-6751995) | |
| 268-408, gnl|hg17|chr17 (1318027-1318134) | |
| 268-408, gnl|Hg17|chr17 (1318171-1318031) | |
| 268-408, gnl|loxAfr1|scaffold_5401 (73834-73727) | |
| 268-408, gnl|mm7|chr11 (75753303-75753196) | |
| 268-408, gnl|Mm7|chr11 (75753157-75753297) | |
| 268-408, gnl|monDom2|scaffold_86 (2613439-2613546) | |
| 268-408, gnl|oryCun1|scaffold_179001 (82741-82634) | |
| 268-408, gnl|panTro1|chr19_random (4203859-4203966) | |
| 268-408, gnl|rheMac2|chr16 (1261021-1261128) | |
| 268-408, gnl|rn3|chr10 (63019267-63019160) | |
| 268-408, gnl|tetNig1|chr7 (5361241-5361344) | |
| 268-408, gnl|xenTro1|scaffold_1149 (149533-149426) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| clu (0.358938) | |
| cty (0.10408) |