Non-Coding RNA Search

Ss1.1-rpigca0_006582.5.5

Sequence:


               
               ATGGCCTGGACGGTGCTTCTGATCGGCTCCTCGCTGGTCGGCTCAGGGGTGGATTCTCAG
ACTGTGATCCAGGAGCCGGCGATGTCAGTGTCTCTTGGAGGGACCGTCACACTCACCTGT
GCCTTTAGGTCTGGGTCAGTCACTAGTAGTAACTACCCTGGCTGGTTCCAGCAGACACCA
GGCCAGCCTCCTCGAACTGTTATCTATCAAACAAACAACCGCCCGACTGGGGTCCCCAGT
CGCTTCTCTGGAGCCATCTCTGGGAACAAAGCCACCCTCACCATCACGGGGGCCCAGGCT
GAGGACGAGGCCGACTACTTCTGTGCTCTGGGGAAAAGTGGTGGTACAGTTAACTTCGGC
GGTGGGACCCATCTGACCGTCCTCGGTCAGCCCAAGGCCGCTCCCACGGTCAACCTCTTC
CCGCCCTCCTCTGAGGAGCTCGGCACCAACAAGGCCACCCTGGTGTGTCTAATAAGTGAC
TTCTACCCGGGCGCCGTGACGGTGACCTGGAAGGCAGGCGGCACCACC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATGGCCTGGACGGTGCTTCTGATCGGCTCCTCGCTGGTCGGCTCAGGGGTGGATTCTCAG
ACTGTGATCCAGGAGCCGGCGATGTCAGTGTCTCTTGGAGGGACCGTCACACTCACCTGT
GCCTTTAGGTCTGGGTCAGTCACTAGTAGTAACTACCCTGGCTGGTTCCAGCAGACACCA
GGCCAGCCTCCTCGAACTGTTATCTATCAAACAAACAACCGCCCGACTGGGGTCCCCAGT
CGCTTCTCTGGAGCCATCTCTGGGAACAAAGCCACCCTCACCATCACGGGGGCCCAGGCT
GAGGACGAGGCCGACTACTTCTGTGCTCTGGGGAAAAGTGGTGGTACAGTTAACTTCGGC
GGTGGGACCCATCTGACCGTCCTCGGTCAGCCCAAGGCCGCTCCCACGGTCAACCTCTTC
CCGCCCTCCTCTGAGGAGCTCGGCACCAACAAGGCCACCCTGGTGTGTCTAATAAGTGAC
TTCTACCCGGGCGCCGTGACGGTGACCTGGAAGGCAGGCGGCACCACC

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               gi|2765427|emb|CAA75033.1|

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               gi|2765427|emb|CAA75033.1|

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               385-528, gnl|bosTau2|chr17 (41403615-41403758)
               

               
               385-528, gnl|Hg17|chr22 (21586260-21586403)
               

               
               385-528, gnl|Mm7|chr16_random (2587805-2587948)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               385-528, gnl|bosTau2|chr17 (41403615-41403758)
               

               
               385-528, gnl|Hg17|chr22 (21586260-21586403)
               

               
               385-528, gnl|Mm7|chr16_random (2587805-2587948)

Expressed library(ies): 6 entry(ies)

More info

Expressed library(ies): 6 entry(ies)

Help | Less info


               
               csp (1.77305)
               

               
               clu (0.598229)
               

               
               cly (0.361925)
               

               
               cag (0.302389)
               

               
               cga (0.279096)
               

               
               duo (0.172801)

Expressed library(ies): 6 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               csp (1.77305)
               

               
               clu (0.598229)
               

               
               cly (0.361925)
               

               
               cag (0.302389)
               

               
               cga (0.279096)
               

               
               duo (0.172801)

	385-528, gnl\|bosTau2\|chr17 (41403615-41403758)
	385-528, gnl\|Hg17\|chr22 (21586260-21586403)
	385-528, gnl\|Mm7\|chr16_random (2587805-2587948)

	csp (1.77305)
	clu (0.598229)
	cly (0.361925)
	cag (0.302389)
	cga (0.279096)
	duo (0.172801)