Non-Coding RNA Search

Ss1.1-rpigca0_007517.5

Sequence:


               
               GGCTCTCCCCCGACCCTCCTCCCTTCCCCCTCCCGGATCGCGATGGACGCGGCCTCCCCC
CGCCGCCGCCGCCGGCAGCACCGCGCGGGCCTCTGAGCTGTAAGGCCGGAGGAGCCGCGT
GCCGGGGACGGGACGTGCGCTGGCTGCCGCTGGTCTGGGGAACCTCTCGCTTCCCCGTCA
CCAGGTCCCCGCGGAGGAAGGGGAGGGACGAGGAGCGGCTTTTCCTGTGCCGCTTGCCCG
GCTCGACCTGCGCGGCCTGCGGCTTCCTGGGAACTCTAGGGCCGCGGCCGGGCCTGGCTC
TGCCCGCGGCCTGCTTGGAGCTGGACCGGAGTGGTTTGGGAGGACAGGCCCGGGTAAGAG
CTTGAGGGAAGGGGAGGCGGGGACTCCCTGGGCGGTCGGAACGGCCCTGGTGCCGGGATG
AGGGATGCCCGGCGGCGGGCTGGGAGCGAGACCCCGGCCCCTGGTAAGGTCGGCGGCACT
GCTGTTGACTTACCCTCTTAGCCCCTTTGTTTCCCAGCCTTGGCTCTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCTCTCCCCCGACCCTCCTCCCTTCCCCCTCCCGGATCGCGATGGACGCGGCCTCCCCC
CGCCGCCGCCGCCGGCAGCACCGCGCGGGCCTCTGAGCTGTAAGGCCGGAGGAGCCGCGT
GCCGGGGACGGGACGTGCGCTGGCTGCCGCTGGTCTGGGGAACCTCTCGCTTCCCCGTCA
CCAGGTCCCCGCGGAGGAAGGGGAGGGACGAGGAGCGGCTTTTCCTGTGCCGCTTGCCCG
GCTCGACCTGCGCGGCCTGCGGCTTCCTGGGAACTCTAGGGCCGCGGCCGGGCCTGGCTC
TGCCCGCGGCCTGCTTGGAGCTGGACCGGAGTGGTTTGGGAGGACAGGCCCGGGTAAGAG
CTTGAGGGAAGGGGAGGCGGGGACTCCCTGGGCGGTCGGAACGGCCCTGGTGCCGGGATG
AGGGATGCCCGGCGGCGGGCTGGGAGCGAGACCCCGGCCCCTGGTAAGGTCGGCGGCACT
GCTGTTGACTTACCCTCTTAGCCCCTTTGTTTCCCAGCCTTGGCTCTG

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-528, gnl|bosTau2|chr1 (59581618-59581088)
               

               
               1-528, gnl|Hg17|chr14 (30746709-30746169)
               

               
               1-528, gnl|Mm7|chr12 (49842408-49841878)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-528, gnl|bosTau2|chr1 (59581618-59581088)
               

               
               1-528, gnl|Hg17|chr14 (30746709-30746169)
               

               
               1-528, gnl|Mm7|chr12 (49842408-49841878)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               clu (0.957167)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               clu (0.957167)

	1-528, gnl\|bosTau2\|chr1 (59581618-59581088)
	1-528, gnl\|Hg17\|chr14 (30746709-30746169)
	1-528, gnl\|Mm7\|chr12 (49842408-49841878)