Ss1.1-rpigca0_007538.5.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TCCCATTATGGCAGCAAATCCACAGAGAGATTGTCTGGTGAGCCTGGGAGTGCAGAGCAA GGAAGGCGGCGAGCCAGGTCCTCCTCGGTGCCTCGGGAGGTGCCCCGACTGTCCCTGAGT TCGGAATCTGAGCCCACCTCCTCCAGGCTGTTCCCTGAGAAGGGCAGGACCGCAGAAGAT AGTTCACAGGCAGCTCGGGATGGAACGAGAGGAGTGGCCAGTGCCGGACAGCCAGACAGG GTCACCTTCCAGGGCCAATACACAGGCCAGGAGTACCATGTTCTGACCCCCAAGACTGTC CTGAGAGGCAATGGCCCAGTTTCCTGTCCCCACTGTCAACCCGTTAGGACCCAAGACCCA GGTGGTGCTGTCACCAAGGACCCACTGGGACCATCTCCTGCTGGGACCCTGCAGTGTCCC CTGTGTGGTCAAGCTAGGTCCCCCTCTGAGGGGACTGGCCCAGACTCAGCCACCTCTGCA CCAGAAAAGGCCGCCCCCAGAAGAAATGCACCTTCAACCTCCAGCCCCAAGCAGAGGAGC AAGCAGGCAGGGTCGCCGCCCCGGCCGCCCCCCGGACTGTGGTATCTGGCAGCGGCACCC ACAGCACCAGTTCCTCCGGCCTTTGCCTACATCTCCTCGGTTCCCGTCATGCCTTATCCA TCAGCCGCCGTGTACTACGCACCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TCCCATTATGGCAGCAAATCCACAGAGAGATTGTCTGGTGAGCCTGGGAGTGCAGAGCAA GGAAGGCGGCGAGCCAGGTCCTCCTCGGTGCCTCGGGAGGTGCCCCGACTGTCCCTGAGT TCGGAATCTGAGCCCACCTCCTCCAGGCTGTTCCCTGAGAAGGGCAGGACCGCAGAAGAT AGTTCACAGGCAGCTCGGGATGGAACGAGAGGAGTGGCCAGTGCCGGACAGCCAGACAGG GTCACCTTCCAGGGCCAATACACAGGCCAGGAGTACCATGTTCTGACCCCCAAGACTGTC CTGAGAGGCAATGGCCCAGTTTCCTGTCCCCACTGTCAACCCGTTAGGACCCAAGACCCA GGTGGTGCTGTCACCAAGGACCCACTGGGACCATCTCCTGCTGGGACCCTGCAGTGTCCC CTGTGTGGTCAAGCTAGGTCCCCCTCTGAGGGGACTGGCCCAGACTCAGCCACCTCTGCA CCAGAAAAGGCCGCCCCCAGAAGAAATGCACCTTCAACCTCCAGCCCCAAGCAGAGGAGC AAGCAGGCAGGGTCGCCGCCCCGGCCGCCCCCCGGACTGTGGTATCTGGCAGCGGCACCC ACAGCACCAGTTCCTCCGGCCTTTGCCTACATCTCCTCGGTTCCCGTCATGCCTTATCCA TCAGCCGCCGTGTACTACGCACCT |
| Aligned organism(s): 24 entry(ies) | More info |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
| 119-266, gnl|bosTau2|chr8 (57553905-57553758) | |
| 119-266, gnl|canFam2|chr11 (71599415-71599634) | |
| 119-266, gnl|dasNov1|scaffold_8571 (33114-32903) | |
| 119-266, gnl|echTel1|scaffold_314078 (49611-49835) | |
| 119-266, gnl|hg17|chr9 (114187679-114187894) | |
| 119-266, gnl|Hg17|chr9 (114187843-114187696) | |
| 119-266, gnl|mm7|chr4 (62807015-62807212) | |
| 119-266, gnl|Mm7|chr4 (62807165-62807018) | |
| 119-266, gnl|monDom2|scaffold_38 (4200528-4200707) | |
| 119-266, gnl|panTro1|chr11 (98721516-98721731) | |
| 119-266, gnl|rheMac2|chr15 (21781270-21781053) | |
| 119-266, gnl|rn3|chr5 (80340577-80340774) | |
| 478-674, gnl|bosTau2|chr8 (57550198-57550002) | |
| 478-674, gnl|canFam2|chr11 (71596631-71596920) | |
| 478-674, gnl|dasNov1|scaffold_8571 (37245-36959) | |
| 478-674, gnl|echTel1|scaffold_314078 (45360-45611) | |
| 478-674, gnl|hg17|chr9 (114183333-114183626) | |
| 478-674, gnl|Hg17|chr9 (114183560-114183364) | |
| 478-674, gnl|mm7|chr4 (62804135-62804408) | |
| 478-674, gnl|Mm7|chr4 (62804349-62804166) | |
| 478-674, gnl|monDom2|scaffold_38 (4198656-4198974) | |
| 478-674, gnl|panTro1|chr11 (98717179-98717472) | |
| 478-674, gnl|rheMac2|chr15 (21785838-21785545) | |
| 478-674, gnl|rn3|chr5 (80337841-80338117) |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 119-266, gnl|bosTau2|chr8 (57553905-57553758) | |
| 119-266, gnl|canFam2|chr11 (71599415-71599634) | |
| 119-266, gnl|dasNov1|scaffold_8571 (33114-32903) | |
| 119-266, gnl|echTel1|scaffold_314078 (49611-49835) | |
| 119-266, gnl|hg17|chr9 (114187679-114187894) | |
| 119-266, gnl|Hg17|chr9 (114187843-114187696) | |
| 119-266, gnl|mm7|chr4 (62807015-62807212) | |
| 119-266, gnl|Mm7|chr4 (62807165-62807018) | |
| 119-266, gnl|monDom2|scaffold_38 (4200528-4200707) | |
| 119-266, gnl|panTro1|chr11 (98721516-98721731) | |
| 119-266, gnl|rheMac2|chr15 (21781270-21781053) | |
| 119-266, gnl|rn3|chr5 (80340577-80340774) | |
| 478-674, gnl|bosTau2|chr8 (57550198-57550002) | |
| 478-674, gnl|canFam2|chr11 (71596631-71596920) | |
| 478-674, gnl|dasNov1|scaffold_8571 (37245-36959) | |
| 478-674, gnl|echTel1|scaffold_314078 (45360-45611) | |
| 478-674, gnl|hg17|chr9 (114183333-114183626) | |
| 478-674, gnl|Hg17|chr9 (114183560-114183364) | |
| 478-674, gnl|mm7|chr4 (62804135-62804408) | |
| 478-674, gnl|Mm7|chr4 (62804349-62804166) | |
| 478-674, gnl|monDom2|scaffold_38 (4198656-4198974) | |
| 478-674, gnl|panTro1|chr11 (98717179-98717472) | |
| 478-674, gnl|rheMac2|chr15 (21785838-21785545) | |
| 478-674, gnl|rn3|chr5 (80337841-80338117) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| clu (0.358938) | |
| jej (0.0989218) |