Non-Coding RNA Search

Ss1.1-rpigca0_007706.5

Sequence:


               
               GCCCAGACCCAGCAGTGGCGGCACCCGCTGGGCGCCTGGAGCTTGGTGAGGCGAGGTCTC
TGCAGATCTGGCTCTTGGCACTGGGCCCCTGGCAGAGGCATGGCTGCCAGGCTGGGCCCC
CGCAGGCAGCATCTCCCGCTGCTGAAGAGGAGGGGAGTCCTGCTGCTGAAACTCACGGCC
GTGACCTTAGCGGTGCTTCTGTTCTGTGAATTCCTCGTCTACTACTTAGTAATCTTTCGC
TGTAACTGGCCTGAGGTGAAACCTCCCACGGACTCAGACGGTGGCCACGGGACCCCTGAG
CCTGTGCTCAGGGCCATGTTTTTGGCTGACACCCACCTGCTCGGGGCCTTGCGAGGCCAC
TGGCTGGACAAGTTACGGAGGGAGTGGCAGATGGAGAGAGCCTTCCAGACGGCGCTGTGG
CTGCTGCAGCCGGAGGTGGCCTTCATTCTGGGGGACGTCTTTGATGAAGGGAAGTGGAGC
TCCCCCCAGGTGGGACCCTGCGACCTCTGCACACTCATCCTGCGGCCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCCAGACCCAGCAGTGGCGGCACCCGCTGGGCGCCTGGAGCTTGGTGAGGCGAGGTCTC
TGCAGATCTGGCTCTTGGCACTGGGCCCCTGGCAGAGGCATGGCTGCCAGGCTGGGCCCC
CGCAGGCAGCATCTCCCGCTGCTGAAGAGGAGGGGAGTCCTGCTGCTGAAACTCACGGCC
GTGACCTTAGCGGTGCTTCTGTTCTGTGAATTCCTCGTCTACTACTTAGTAATCTTTCGC
TGTAACTGGCCTGAGGTGAAACCTCCCACGGACTCAGACGGTGGCCACGGGACCCCTGAG
CCTGTGCTCAGGGCCATGTTTTTGGCTGACACCCACCTGCTCGGGGCCTTGCGAGGCCAC
TGGCTGGACAAGTTACGGAGGGAGTGGCAGATGGAGAGAGCCTTCCAGACGGCGCTGTGG
CTGCTGCAGCCGGAGGTGGCCTTCATTCTGGGGGACGTCTTTGATGAAGGGAAGTGGAGC
TCCCCCCAGGTGGGACCCTGCGACCTCTGCACACTCATCCTGCGGCCT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61810721|ref|XP_583331.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61810721|ref|XP_583331.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               86-381, gnl|bosTau2|chr24 (31665634-31665329)
               

               
               86-381, gnl|Hg17|chr18 (11887278-11886982)
               

               
               86-381, gnl|Mm7|chr18 (67629935-67629644)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               86-381, gnl|bosTau2|chr24 (31665634-31665329)
               

               
               86-381, gnl|Hg17|chr18 (11887278-11886982)
               

               
               86-381, gnl|Mm7|chr18 (67629935-67629644)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               clu (0.358938)
               

               
               nmm (0.132802)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               clu (0.358938)
               

               
               nmm (0.132802)

	86-381, gnl\|bosTau2\|chr24 (31665634-31665329)
	86-381, gnl\|Hg17\|chr18 (11887278-11886982)
	86-381, gnl\|Mm7\|chr18 (67629935-67629644)