Non-Coding RNA Search

Ss1.1-rpigca0_007778.5

Sequence:


               
               TGTTTCACAAATTTGAGAATTGTGCTGAGTGCAGGGGCTGAGCGGTGAGAGACCTGAAGA
TACTCAGCTTCTTTTCACCTGCTTTTTGGAATGTCCACGGACTCTTGTGTATGCTGAGTG
GATTTGGCTCAGAGTTGTTGGTATTTGCTTTGGAGAGGGTGGAGCTGAACCAAGTTCTCT
TTTTTTTTTTTTTTTCCTCTCTGAGGTGTTGATCTTAACTCTTAACCTGCTGAATTTTAA
AAAATAAGCAAGCAAGTAACACGTACAGCTTGTGAGGAGAACTGCACTCCTGGCCAGGGG
CTTGGAAAGTTGCCGGCAGAGGGGTGCTGCTTAACCCCTTTATATTCCTCCCCAAGGCTT
CAGGATGCTCTTTCTCATTGCTCTTTATGTAAGAACTCTGCGGAAACGAGAGCCTAGGAG
GAGCACTGCAATCCACTTCTCTTTGTGTCTGGGTATGTACATGCGGGTGGGTGGAGTGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGTTTCACAAATTTGAGAATTGTGCTGAGTGCAGGGGCTGAGCGGTGAGAGACCTGAAGA
TACTCAGCTTCTTTTCACCTGCTTTTTGGAATGTCCACGGACTCTTGTGTATGCTGAGTG
GATTTGGCTCAGAGTTGTTGGTATTTGCTTTGGAGAGGGTGGAGCTGAACCAAGTTCTCT
TTTTTTTTTTTTTTTCCTCTCTGAGGTGTTGATCTTAACTCTTAACCTGCTGAATTTTAA
AAAATAAGCAAGCAAGTAACACGTACAGCTTGTGAGGAGAACTGCACTCCTGGCCAGGGG
CTTGGAAAGTTGCCGGCAGAGGGGTGCTGCTTAACCCCTTTATATTCCTCCCCAAGGCTT
CAGGATGCTCTTTCTCATTGCTCTTTATGTAAGAACTCTGCGGAAACGAGAGCCTAGGAG
GAGCACTGCAATCCACTTCTCTTTGTGTCTGGGTATGTACATGCGGGTGGGTGGAGTGGG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-480, gnl|bosTau2|chr7 (35450777-35450311)
               

               
               2-480, gnl|Hg17|chr5 (140976745-140976278)
               

               
               2-480, gnl|Mm7|chr18 (38309667-38309227)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-480, gnl|bosTau2|chr7 (35450777-35450311)
               

               
               2-480, gnl|Hg17|chr5 (140976745-140976278)
               

               
               2-480, gnl|Mm7|chr18 (38309667-38309227)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               clu (0.358938)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               clu (0.358938)

	2-480, gnl\|bosTau2\|chr7 (35450777-35450311)
	2-480, gnl\|Hg17\|chr5 (140976745-140976278)
	2-480, gnl\|Mm7\|chr18 (38309667-38309227)