Non-Coding RNA Search

Ss1.1-rpigca0_008513.5

Sequence:


               
               GAGGCTTTTCTACCCCAGGACTTTGTACACATTCTTCCTGCCGTCTTCTACACTTTCTGA
GCATTCTTTGCTCTACTTTCTACTCTGTCTTTCATTCTCAATTTAAAGGTTGCTTCCTGA
GCCACCTCCTTGCCCCCCTTATCTGAATTACCTTGCTGTGCTATTCCTTTATGTTTTCCT
GACTTTTCCCTTCATACTACTTACTTACATACTCAATTACTTATCTAATTATCTGATATT
CATTTGTATCTTCACTATCTGTCTCCCAACTCAGTGAACTCAGGGAGTGTGGCTATTTTG
TTCACCATTGTTTTCCCAGAGGTTAGCCCACCAATAGACACTGTCTAAATATTTGTTGAT
AAAATGAGTCCATAAATGAAAGAATAAATGATTCAAAGGGAGACTCTGCATTTTCTCTTA
TCTATTCATATTAAATAGATATGCCTCTTTATCCTGACTACAGGTAACAACTGTTCCTGA
TTTAGTGTATGATTGAGGATGCTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGGCTTTTCTACCCCAGGACTTTGTACACATTCTTCCTGCCGTCTTCTACACTTTCTGA
GCATTCTTTGCTCTACTTTCTACTCTGTCTTTCATTCTCAATTTAAAGGTTGCTTCCTGA
GCCACCTCCTTGCCCCCCTTATCTGAATTACCTTGCTGTGCTATTCCTTTATGTTTTCCT
GACTTTTCCCTTCATACTACTTACTTACATACTCAATTACTTATCTAATTATCTGATATT
CATTTGTATCTTCACTATCTGTCTCCCAACTCAGTGAACTCAGGGAGTGTGGCTATTTTG
TTCACCATTGTTTTCCCAGAGGTTAGCCCACCAATAGACACTGTCTAAATATTTGTTGAT
AAAATGAGTCCATAAATGAAAGAATAAATGATTCAAAGGGAGACTCTGCATTTTCTCTTA
TCTATTCATATTAAATAGATATGCCTCTTTATCCTGACTACAGGTAACAACTGTTCCTGA
TTTAGTGTATGATTGAGGATGCTG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               5-504, gnl|bosTau2|chr22 (25183845-25184336)
               

               
               5-504, gnl|Hg17|chr3 (69906804-69907265)
               

               
               5-504, gnl|Mm7|chr6 (97926729-97927176)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-504, gnl|bosTau2|chr22 (25183845-25184336)
               

               
               5-504, gnl|Hg17|chr3 (69906804-69907265)
               

               
               5-504, gnl|Mm7|chr6 (97926729-97927176)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               clu (0.239292)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               clu (0.239292)

	5-504, gnl\|bosTau2\|chr22 (25183845-25184336)
	5-504, gnl\|Hg17\|chr3 (69906804-69907265)
	5-504, gnl\|Mm7\|chr6 (97926729-97927176)