Ss1.1-rpigca0_008582.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTGGGTTGGCGTCATCCGATACTTGGGTTACTTCCAAGCATATAACGTGCTGATTTTAAC CATGCAAGCCTCGCTGCCGAAAGTTCTTCGCTTCTGCGCATGTGCTGGGATGATCTATCT GGGTTACACCTTCTGCGGCTGGATTGTCTTAGGACCCTATCACAACAAGTTCGAAAAGCT GAACACAGTTGCTGAGTGTCTGTTCTCCCTGGTCAACGGTGATGACATGTATGCAACCTT TGCCCACATCCAGCAGAAGAGCCTCTTGGTGTGGCTGTTCAGTCGCCTGTATTTATACTC CTTCATCAGCCTCTTTATATATATGATTCTCAGTCTTTTCATTGCACTTATTACAGACTC TTATGACACCATTAAGAAATACCAAAAGAATGGGTTTCCTGCCACGGATCTTCAGGAATT CCTGAAGGAGTGTAGTAGCAAAGAGAAGTGTCAGCAAGAGTCATCGGCATTCCTGCCCCG CATCTGCTGTCTGAGGAGGAATGGAAGTGATGACCACTTGATACTTGTTAACTAAAATTC TTCTGCTGAAGATAATCAAGCTTCAGGTCTCCTCACGTTGACTGAAAATGCAGAGGGACC CCGATTTGTGTGGACCAGCACTTCCAAAAATACTGATCGTGGAGTGGGAAAGAGGACTGT CAGCTGGCTGAATAGACCTAAAGTTCCAAAGTTCCTTTTTATAAATTTGGATGATGAAGA ATAGACCACACTTAACTACTCATA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTGGGTTGGCGTCATCCGATACTTGGGTTACTTCCAAGCATATAACGTGCTGATTTTAAC CATGCAAGCCTCGCTGCCGAAAGTTCTTCGCTTCTGCGCATGTGCTGGGATGATCTATCT GGGTTACACCTTCTGCGGCTGGATTGTCTTAGGACCCTATCACAACAAGTTCGAAAAGCT GAACACAGTTGCTGAGTGTCTGTTCTCCCTGGTCAACGGTGATGACATGTATGCAACCTT TGCCCACATCCAGCAGAAGAGCCTCTTGGTGTGGCTGTTCAGTCGCCTGTATTTATACTC CTTCATCAGCCTCTTTATATATATGATTCTCAGTCTTTTCATTGCACTTATTACAGACTC TTATGACACCATTAAGAAATACCAAAAGAATGGGTTTCCTGCCACGGATCTTCAGGAATT CCTGAAGGAGTGTAGTAGCAAAGAGAAGTGTCAGCAAGAGTCATCGGCATTCCTGCCCCG CATCTGCTGTCTGAGGAGGAATGGAAGTGATGACCACTTGATACTTGTTAACTAAAATTC TTCTGCTGAAGATAATCAAGCTTCAGGTCTCCTCACGTTGACTGAAAATGCAGAGGGACC CCGATTTGTGTGGACCAGCACTTCCAAAAATACTGATCGTGGAGTGGGAAAGAGGACTGT CAGCTGGCTGAATAGACCTAAAGTTCCAAAGTTCCTTTTTATAAATTTGGATGATGAAGA ATAGACCACACTTAACTACTCATA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 168-376, gnl|bosTau2|chr3 (44627682-44627890) | |
| 168-376, gnl|canFam2|chr6 (66062710-66062465) | |
| 168-376, gnl|danRer3|chr23 (26783445-26783657) | |
| 168-376, gnl|dasNov1|scaffold_8615 (12636-12880) | |
| 168-376, gnl|echTel1|scaffold_310061 (38768-38528) | |
| 168-376, gnl|fr1|chrUn (100425117-100425349) | |
| 168-376, gnl|galGal2|chr8 (16739024-16738777) | |
| 168-376, gnl|hg17|chr1 (85109050-85109296) | |
| 168-376, gnl|Hg17|chr1 (85109274-85109066) | |
| 168-376, gnl|loxAfr1|scaffold_27013 (36147-35899) | |
| 168-376, gnl|mm7|chr3 (146089043-146088796) | |
| 168-376, gnl|Mm7|chr3 (146088817-146089025) | |
| 168-376, gnl|monDom2|scaffold_54 (623710-623944) | |
| 168-376, gnl|oryCun1|scaffold_177597 (76207-76453) | |
| 168-376, gnl|panTro1|chr1 (83780050-83780296) | |
| 168-376, gnl|rheMac2|chr1 (87725661-87725907) | |
| 168-376, gnl|rn3|chr2 (244367447-244367201) | |
| 168-376, gnl|tetNig1|chr1 (11969812-11969597) | |
| 168-376, gnl|xenTro1|scaffold_513 (161315-161083) | |
| 497-740, gnl|bosTau2|chr3 (44632231-44632476) | |
| 497-740, gnl|Hg17|chr1 (85104427-85104176) | |
| 497-740, gnl|Mm7|chr3 (146093312-146093552) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 168-376, gnl|bosTau2|chr3 (44627682-44627890) | |
| 168-376, gnl|canFam2|chr6 (66062710-66062465) | |
| 168-376, gnl|danRer3|chr23 (26783445-26783657) | |
| 168-376, gnl|dasNov1|scaffold_8615 (12636-12880) | |
| 168-376, gnl|echTel1|scaffold_310061 (38768-38528) | |
| 168-376, gnl|fr1|chrUn (100425117-100425349) | |
| 168-376, gnl|galGal2|chr8 (16739024-16738777) | |
| 168-376, gnl|hg17|chr1 (85109050-85109296) | |
| 168-376, gnl|Hg17|chr1 (85109274-85109066) | |
| 168-376, gnl|loxAfr1|scaffold_27013 (36147-35899) | |
| 168-376, gnl|mm7|chr3 (146089043-146088796) | |
| 168-376, gnl|Mm7|chr3 (146088817-146089025) | |
| 168-376, gnl|monDom2|scaffold_54 (623710-623944) | |
| 168-376, gnl|oryCun1|scaffold_177597 (76207-76453) | |
| 168-376, gnl|panTro1|chr1 (83780050-83780296) | |
| 168-376, gnl|rheMac2|chr1 (87725661-87725907) | |
| 168-376, gnl|rn3|chr2 (244367447-244367201) | |
| 168-376, gnl|tetNig1|chr1 (11969812-11969597) | |
| 168-376, gnl|xenTro1|scaffold_513 (161315-161083) | |
| 497-740, gnl|bosTau2|chr3 (44632231-44632476) | |
| 497-740, gnl|Hg17|chr1 (85104427-85104176) | |
| 497-740, gnl|Mm7|chr3 (146093312-146093552) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| mgm (0.180343) | |
| mcp (0.170648) | |
| nje (0.16592) | |
| clu (0.119646) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| mgm (0.180343) | |
| mcp (0.170648) | |
| nje (0.16592) | |
| clu (0.119646) |