Non-Coding RNA Search

Ss1.1-rpigca0_009304.5

Sequence:


               
               TATTTTTTTTTTTAACTTAGGTTTACAAAATTTATTTTCAGTTAAATTGATTTTCTTCTG
CTTGTTTCAGTACAGCTATTGGAATCAGGTGTAAAGATGGCGTTGTCTTTGGGGTGGAAA
AATTAGTCCTTTCTAAACTTTATGAAGAAGGATCCAACAAACGACTTTTTAATGTTGATC
GGCATGTTGGAATGGTAAGGACACATTTAAAAATGTTCTGTTTTGCCTTGTCCAATTTCT
TGTGAACTAATAGGAATATATTAAAATGTGATCATAAGAACCCATTTATTACTTTAGTAT
TGAGGCAGAAACAGATCAGAGAACAGCCACAGAAGTAATCACAGAGAGTGGTTTCTGAAC
AGTTCACTGTCTAAGAGAAAGTTTGTATTCCCATAATCTGATTGGAGATATATATGAAAA
CTCAAGTTGCTTTAAGAAGCAGAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TATTTTTTTTTTTAACTTAGGTTTACAAAATTTATTTTCAGTTAAATTGATTTTCTTCTG
CTTGTTTCAGTACAGCTATTGGAATCAGGTGTAAAGATGGCGTTGTCTTTGGGGTGGAAA
AATTAGTCCTTTCTAAACTTTATGAAGAAGGATCCAACAAACGACTTTTTAATGTTGATC
GGCATGTTGGAATGGTAAGGACACATTTAAAAATGTTCTGTTTTGCCTTGTCCAATTTCT
TGTGAACTAATAGGAATATATTAAAATGTGATCATAAGAACCCATTTATTACTTTAGTAT
TGAGGCAGAAACAGATCAGAGAACAGCCACAGAAGTAATCACAGAGAGTGGTTTCTGAAC
AGTTCACTGTCTAAGAGAAAGTTTGTATTCCCATAATCTGATTGGAGATATATATGAAAA
CTCAAGTTGCTTTAAGAAGCAGAG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|28195693|gb|AAO27765.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|28195693|gb|AAO27765.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-381, gnl|bosTau2|chr10 (48094914-48094523)
               

               
               3-381, gnl|Hg17|chr14 (57788512-57788850)
               

               
               3-381, gnl|Mm7|chr12 (68927088-68927464)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-381, gnl|bosTau2|chr10 (48094914-48094523)
               

               
               3-381, gnl|Hg17|chr14 (57788512-57788850)
               

               
               3-381, gnl|Mm7|chr12 (68927088-68927464)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               spl (0.143184)
               

               
               clu (0.119646)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spl (0.143184)
               

               
               clu (0.119646)

	3-381, gnl\|bosTau2\|chr10 (48094914-48094523)
	3-381, gnl\|Hg17\|chr14 (57788512-57788850)
	3-381, gnl\|Mm7\|chr12 (68927088-68927464)