Non-Coding RNA Search

Ss1.1-rpigca0_009403.5

Sequence:


               
               GTGCTCAACTTTTGTGTAAATTACCCTGGAGGTTACTCTTGTTACTGTGATGGGAAGAGA
GGATTCAAACTTGCCCAAGATCAGAAGAGTTGTGAGGCTGTTCCAGTGTGCCTTCCTTTG
AACCTTGACAAAAATTATGAATTGCTTTACTTGGCAGAGCAGTTTGTAGGGGTTGTTTTG
TATTTAAAATTTCGTTTGCCAGAAATCACCAGATTTTCAGCTGAATTTGATTTCCGGACA
TATGATTCAGAAGGTGTTATCCTGTATGCAGAATCTTCTGATCATTCAGCTTGGTTCCTG
ATTGCACTTCGTGATGGAAAGATTGAAATTCAGTTTAAGAATGAACATACAACCAAAATC
ACAACTGGAGGCAGAGTTATTAATGATGGTCTATGGAATATGGTCTCTGTGGAAGAATTA
GAGCAGAGTATTAGTGTAAAAATAGCTAAAGAAGCTGTAATGAATATAAATAAACCTGAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGCTCAACTTTTGTGTAAATTACCCTGGAGGTTACTCTTGTTACTGTGATGGGAAGAGA
GGATTCAAACTTGCCCAAGATCAGAAGAGTTGTGAGGCTGTTCCAGTGTGCCTTCCTTTG
AACCTTGACAAAAATTATGAATTGCTTTACTTGGCAGAGCAGTTTGTAGGGGTTGTTTTG
TATTTAAAATTTCGTTTGCCAGAAATCACCAGATTTTCAGCTGAATTTGATTTCCGGACA
TATGATTCAGAAGGTGTTATCCTGTATGCAGAATCTTCTGATCATTCAGCTTGGTTCCTG
ATTGCACTTCGTGATGGAAAGATTGAAATTCAGTTTAAGAATGAACATACAACCAAAATC
ACAACTGGAGGCAGAGTTATTAATGATGGTCTATGGAATATGGTCTCTGTGGAAGAATTA
GAGCAGAGTATTAGTGTAAAAATAGCTAAAGAAGCTGTAATGAATATAAATAAACCTGAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q8IXC8_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q8IXC8_HUMAN

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               210-417, gnl|bosTau2|chr1 (26877457-26877250)
               

               
               210-417, gnl|Hg17|chr3 (95094659-95094453)
               

               
               210-417, gnl|Mm7|chr16 (62854221-62854426)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               210-417, gnl|bosTau2|chr1 (26877457-26877250)
               

               
               210-417, gnl|Hg17|chr3 (95094659-95094453)
               

               
               210-417, gnl|Mm7|chr16 (62854221-62854426)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               clu (0.478583)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               clu (0.478583)

	210-417, gnl\|bosTau2\|chr1 (26877457-26877250)
	210-417, gnl\|Hg17\|chr3 (95094659-95094453)
	210-417, gnl\|Mm7\|chr16 (62854221-62854426)