Ss1.1-rpigca0_009687.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTCTTTTGCCTTCTTCCTGCTCTTTTCTGTTCCCATGGGAGATCAGAAAGCACCTAGTCC ATCCTAAAATGCCTTTTCTTTCTGGTCCTGTCTCCAGATGCAATTAATTCTCCAGTCACC TGCTGCTATACACTTACCAGTAAGAAGATCTCGATGCAGCGGCTGATGAGCTACAGAAGA GTCACCAGCAGCAAGTGTCCTAAAGAAGCAGTGATGTGAGTTGAACATACCAGCCCTCCA TGGTCCAGTTCTTCCTTGGGGAGCCAGGGGCAAGCCTCCCGCATGTAGCATCAGAGGTTT ACACCCCCTAAGCCAATATCCAAAGATCCCCAATGGGAAAATTGCAGCCACGAGGGAAAA CGCCCCTCCCAGCATCACTTTCCGTCTGGGTTCTTATTCAGATCCTCCCAGTTTCTTTAG CCTGAAGTCAAGATGCCTTCAACTGGGACATCTGGAGGAGCAGCTAGTCCTGGGCTCCCC CCTTCCACCTGCTCTCCTCCTCAAGTTCCCCTGGCAGATTCTTAGGACAAGTAGGCTGTA TTCCTAGGCTGAAATCGCAATAGAACTCCATCTAACCGCACGCCCTCTCTCCTTCACAGC TTCAAGACCATCGCGGGCAAGGAGATCTGTGCAGAACCCAAGCAGAAGTGGGTCCAGGAC TCCATAAGCCACCTGGACAAGAAAAACCAAACTCCGAAGCCTTGAAGC------------ CCCCGAGAATCT------------------------------------CCCTCAGATATT ATTTTATTATAN |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTCTTTTGCCTTCTTCCTGCTCTTTTCTGTTCCCATGGGAGATCAGAAAGCACCTAGTCC ATCCTAAAATGCCTTTTCTTTCTGGTCCTGTCTCCAGATGCAATTAATTCTCCAGTCACC TGCTGCTATACACTTACCAGTAAGAAGATCTCGATGCAGCGGCTGATGAGCTACAGAAGA GTCACCAGCAGCAAGTGTCCTAAAGAAGCAGTGATGTGAGTTGAACATACCAGCCCTCCA TGGTCCAGTTCTTCCTTGGGGAGCCAGGGGCAAGCCTCCCGCATGTAGCATCAGAGGTTT ACACCCCCTAAGCCAATATCCAAAGATCCCCAATGGGAAAATTGCAGCCACGAGGGAAAA CGCCCCTCCCAGCATCACTTTCCGTCTGGGTTCTTATTCAGATCCTCCCAGTTTCTTTAG CCTGAAGTCAAGATGCCTTCAACTGGGACATCTGGAGGAGCAGCTAGTCCTGGGCTCCCC CCTTCCACCTGCTCTCCTCCTCAAGTTCCCCTGGCAGATTCTTAGGACAAGTAGGCTGTA TTCCTAGGCTGAAATCGCAATAGAACTCCATCTAACCGCACGCCCTCTCTCCTTCACAGC TTCAAGACCATCGCGGGCAAGGAGATCTGTGCAGAACCCAAGCAGAAGTGGGTCCAGGAC TCCATAAGCCACCTGGACAAGAAAAACCAAACTCCGAAGCCTTGAAGC------------ CCCCGAGAATCT------------------------------------CCCTCAGATATT ATTTTATTATAN |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 27 entry(ies) | More info |
| Aligned organism(s): 27 entry(ies) | Help | Less info |
| 3-331, gnl|bosTau2|chr19 (10525737-10525405) | |
| 3-331, gnl|canFam2|chr9 (42330884-42330609) | |
| 3-331, gnl|dasNov1|scaffold_1394 (3102-2819) | |
| 3-331, gnl|echTel1|scaffold_310402 (98824-98474) | |
| 3-331, gnl|hg17|chr17 (29607254-29607528) | |
| 3-331, gnl|Hg17|chr17 (29607261-29607624) | |
| 3-331, gnl|loxAfr1|scaffold_1828 (30236-29982) | |
| 3-331, gnl|mm7|chr11 (82117975-82118232) | |
| 3-331, gnl|Mm7|chr11 (82117977-82118308) | |
| 3-331, gnl|monDom2|scaffold_44 (9003751-9003437) | |
| 3-331, gnl|oryCun1|scaffold_195802 (48519-48812) | |
| 3-331, gnl|panTro1|chr19 (33126719-33126993) | |
| 3-331, gnl|rheMac2|chr16 (29552138-29552412) | |
| 3-331, gnl|rn3|chr10 (70270626-70270889) | |
| 358-705, gnl|bosTau2|chr19 (10525414-10525067) | |
| 358-705, gnl|canFam2|chr9 (42330608-42330303) | |
| 358-705, gnl|dasNov1|scaffold_1394 (2818-2493) | |
| 358-705, gnl|echTel1|scaffold_310402 (98473-98228) | |
| 358-705, gnl|hg17|chr17 (29607529-29607848) | |
| 358-705, gnl|Hg17|chr17 (29607579-29607959) | |
| 358-705, gnl|loxAfr1|scaffold_1828 (29981-29670) | |
| 358-705, gnl|mm7|chr11 (82118233-82118495) | |
| 358-705, gnl|Mm7|chr11 (82118299-82118642) | |
| 358-705, gnl|oryCun1|scaffold_195802 (48813-49139) | |
| 358-705, gnl|panTro1|chr19 (33126994-33127313) | |
| 358-705, gnl|rheMac2|chr16 (29552413-29552732) | |
| 358-705, gnl|rn3|chr10 (70270890-70271168) |
| Aligned organism(s): 27 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 3-331, gnl|bosTau2|chr19 (10525737-10525405) | |
| 3-331, gnl|canFam2|chr9 (42330884-42330609) | |
| 3-331, gnl|dasNov1|scaffold_1394 (3102-2819) | |
| 3-331, gnl|echTel1|scaffold_310402 (98824-98474) | |
| 3-331, gnl|hg17|chr17 (29607254-29607528) | |
| 3-331, gnl|Hg17|chr17 (29607261-29607624) | |
| 3-331, gnl|loxAfr1|scaffold_1828 (30236-29982) | |
| 3-331, gnl|mm7|chr11 (82117975-82118232) | |
| 3-331, gnl|Mm7|chr11 (82117977-82118308) | |
| 3-331, gnl|monDom2|scaffold_44 (9003751-9003437) | |
| 3-331, gnl|oryCun1|scaffold_195802 (48519-48812) | |
| 3-331, gnl|panTro1|chr19 (33126719-33126993) | |
| 3-331, gnl|rheMac2|chr16 (29552138-29552412) | |
| 3-331, gnl|rn3|chr10 (70270626-70270889) | |
| 358-705, gnl|bosTau2|chr19 (10525414-10525067) | |
| 358-705, gnl|canFam2|chr9 (42330608-42330303) | |
| 358-705, gnl|dasNov1|scaffold_1394 (2818-2493) | |
| 358-705, gnl|echTel1|scaffold_310402 (98473-98228) | |
| 358-705, gnl|hg17|chr17 (29607529-29607848) | |
| 358-705, gnl|Hg17|chr17 (29607579-29607959) | |
| 358-705, gnl|loxAfr1|scaffold_1828 (29981-29670) | |
| 358-705, gnl|mm7|chr11 (82118233-82118495) | |
| 358-705, gnl|Mm7|chr11 (82118299-82118642) | |
| 358-705, gnl|oryCun1|scaffold_195802 (48813-49139) | |
| 358-705, gnl|panTro1|chr19 (33126994-33127313) | |
| 358-705, gnl|rheMac2|chr16 (29552413-29552732) | |
| 358-705, gnl|rn3|chr10 (70270890-70271168) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| clu (0.358938) |