Non-Coding RNA Search

Ss1.1-rpigca0_012575.5

Sequence:


               
               TCCATCCATTTTTAAGTATGAACAGAGAGGACAATTTGAAAATCCTGGGACCATATTAGT
TTAGAAATAGCTGTTAGGCAAACATGAGCAAAGGAGTCAGGCCATTAGGGTATTATTTAG
CCAAATCTGTATGTAATTAGGTTCAAGTTACTAAGCTTATACAATTCTCTCTTTGTAAGG
TTTTCATGATAACCTCACAGTGGTCCATAGTTTCTTACAATTCTTTGCAGTCCTCAGGGA
TATCACTACCTCAGGTTAAGGCATACAGGCTATATATAATCTATGCTGACCTTCAGATGC
CTGCAGACATAATAAATGACATCCAGACATCGGGCCAGTTCCCTCACTATGCTCTTCTCT
ATGATGAAACACAGATCACCAACTGCGCCAGACATTTGGGTTTCACCTACACAATGGATT
GCTCTCTTCTGCATTTCTCCAGTTGAGTTTTGAGACTTGGGGAGGCATTTTACCAGTAGA
ATTTGGATGCAATGATAGAAAATCTACAATAAAGGATCTCAAACCAAAAAAAAAAAAAAA
AAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCCATCCATTTTTAAGTATGAACAGAGAGGACAATTTGAAAATCCTGGGACCATATTAGT
TTAGAAATAGCTGTTAGGCAAACATGAGCAAAGGAGTCAGGCCATTAGGGTATTATTTAG
CCAAATCTGTATGTAATTAGGTTCAAGTTACTAAGCTTATACAATTCTCTCTTTGTAAGG
TTTTCATGATAACCTCACAGTGGTCCATAGTTTCTTACAATTCTTTGCAGTCCTCAGGGA
TATCACTACCTCAGGTTAAGGCATACAGGCTATATATAATCTATGCTGACCTTCAGATGC
CTGCAGACATAATAAATGACATCCAGACATCGGGCCAGTTCCCTCACTATGCTCTTCTCT
ATGATGAAACACAGATCACCAACTGCGCCAGACATTTGGGTTTCACCTACACAATGGATT
GCTCTCTTCTGCATTTCTCCAGTTGAGTTTTGAGACTTGGGGAGGCATTTTACCAGTAGA
ATTTGGATGCAATGATAGAAAATCTACAATAAAGGATCTCAAACCAAAAAAAAAAAAAAA
AAAAAAAAAAAA

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-526, gnl|bosTau2|chr9 (40662151-40662670)
               

               
               1-526, gnl|Hg17|chr6 (134353296-134352797)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-526, gnl|bosTau2|chr9 (40662151-40662670)
               

               
               1-526, gnl|Hg17|chr6 (134353296-134352797)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               clu (0.239292)
               

               
               rec (0.17307)
               

               
               ski (0.146735)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               clu (0.239292)
               

               
               rec (0.17307)
               

               
               ski (0.146735)

	1-526, gnl\|bosTau2\|chr9 (40662151-40662670)
	1-526, gnl\|Hg17\|chr6 (134353296-134352797)