Ss1.1-rpigca0_014171.5.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TCCTCATTCTGCTGTCGGGGTGCCCTGGCCCTGACCGGGACCCAGGCGGGTCCCCACTCC CTGAGGTATTTCGACACCGCCGTGTCCCGGCCCGACCGCGGGGAGCCCCGTTTCATCGAA GTCGGCTACGTGGACGACACGCAGTTCGTGCGGTTCGACAGCGACGCCCCGAATCCGCGG ATGGAGCCTCGGGCGCCGTGGATACAGCAGGAGGGGCAGGAGTATTGGGATAGGAACACG CGGAACGCCATGGGCAGCGCACAGACTTTCCGAGTGAACCTGCGCACAGCTCTCGGCTAC TACAACCAGAGCGAGGCCGGGTCTCACACCTTCCAGGTCATGTACGGCTGCGACGTGGGG CCAGACGGGCTCCTCCTCCGCGGGTACGATCAGTACGCCTACGACGGCGCCGATTACATC GCCCTGAACGAGGACCTGCGCTCCTGGACCGCGGCGGACACGGCGGCTCAGATCACCAAG CGCAAGTGGGAGGCGGCCGATGAGGCGGAGCGTAGGAGGAGCTACCTGCAGGGCACGTGT GTGGAGTGGCTCCAGAAATACCTGGAGATGGGGAAGGACACGCTGCAGCGCGCAGAGCCT CCAAAGACACATGTGACCCGCCACCCCAGCTCTGACCTCGGGGTCACCTTGAGGTGCTGG GCCCTGGGCTTCTACCCTAAGGAGATCTCCCTGACCTGGCAGCGCGAGGGCCAGGACCAG AGCCAGGACATGGAGCTGGTGGAGACCAGGCCCTCAGGGGATGGGACCTTCCAGAAGTGG GCGGCCCTGGTGGTGCCTCCTGGAGAGGAGCAGAGCTACACCTGCCATGTGCAGCACGAG GGCCTGCAGGAGCCACTCACCCTGAGATGGGACCCTCCTCAGCCCCCCGTCCCCATCGTG GGCATCATTGTTGGCCTGGTTCTGGTCCTGGTCGCTGGAGCCATGGTGGCTGGAGTTGTG ATCTGGAGGAAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TCCTCATTCTGCTGTCGGGGTGCCCTGGCCCTGACCGGGACCCAGGCGGGTCCCCACTCC CTGAGGTATTTCGACACCGCCGTGTCCCGGCCCGACCGCGGGGAGCCCCGTTTCATCGAA GTCGGCTACGTGGACGACACGCAGTTCGTGCGGTTCGACAGCGACGCCCCGAATCCGCGG ATGGAGCCTCGGGCGCCGTGGATACAGCAGGAGGGGCAGGAGTATTGGGATAGGAACACG CGGAACGCCATGGGCAGCGCACAGACTTTCCGAGTGAACCTGCGCACAGCTCTCGGCTAC TACAACCAGAGCGAGGCCGGGTCTCACACCTTCCAGGTCATGTACGGCTGCGACGTGGGG CCAGACGGGCTCCTCCTCCGCGGGTACGATCAGTACGCCTACGACGGCGCCGATTACATC GCCCTGAACGAGGACCTGCGCTCCTGGACCGCGGCGGACACGGCGGCTCAGATCACCAAG CGCAAGTGGGAGGCGGCCGATGAGGCGGAGCGTAGGAGGAGCTACCTGCAGGGCACGTGT GTGGAGTGGCTCCAGAAATACCTGGAGATGGGGAAGGACACGCTGCAGCGCGCAGAGCCT CCAAAGACACATGTGACCCGCCACCCCAGCTCTGACCTCGGGGTCACCTTGAGGTGCTGG GCCCTGGGCTTCTACCCTAAGGAGATCTCCCTGACCTGGCAGCGCGAGGGCCAGGACCAG AGCCAGGACATGGAGCTGGTGGAGACCAGGCCCTCAGGGGATGGGACCTTCCAGAAGTGG GCGGCCCTGGTGGTGCCTCCTGGAGAGGAGCAGAGCTACACCTGCCATGTGCAGCACGAG GGCCTGCAGGAGCCACTCACCCTGAGATGGGACCCTCCTCAGCCCCCCGTCCCCATCGTG GGCATCATTGTTGGCCTGGTTCTGGTCCTGGTCGCTGGAGCCATGGTGGCTGGAGTTGTG ATCTGGAGGAAG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 53-320, gnl|bosTau2|chr23 (21180741-21180474) | |
| 53-320, gnl|Hg17|chr6 (30335574-30335841) | |
| 53-320, gnl|Mm7|chr17 (33571220-33571487) | |
| 353-603, gnl|bosTau2|chr20 (36655627-36655873) | |
| 353-603, gnl|Hg17|chr6 (31347071-31346829) | |
| 353-603, gnl|Mm7|chr17 (32077846-32077606) | |
| 871-971, gnl|bosTau2|chr23 (23047794-23047694) | |
| 871-971, gnl|canFam2|chr12 (3938333-3938669) | |
| 871-971, gnl|dasNov1|scaffold_10933 (27709-28037) | |
| 871-971, gnl|echTel1|scaffold_220899 (9340-9001) | |
| 871-971, gnl|galGal2|chr16_random (271111-271395) | |
| 871-971, gnl|hg17|chr6 (30004005-30004367) | |
| 871-971, gnl|Hg17|chr6 (30004212-30004318) | |
| 871-971, gnl|loxAfr1|scaffold_35258 (6115-5789) | |
| 871-971, gnl|mm7|chr17 (35139276-35138931) | |
| 871-971, gnl|Mm7|chr17 (34472588-34472491) | |
| 871-971, gnl|monDom2|scaffold_42 (15844035-15844404) | |
| 871-971, gnl|oryCun1|scaffold_176700 (53005-53361) | |
| 871-971, gnl|panTro1|chr5 (30480794-30481160) | |
| 871-971, gnl|rheMac2|chr4 (30877587-30877274) | |
| 871-971, gnl|rn3|chr20 (1647265-1647597) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 53-320, gnl|bosTau2|chr23 (21180741-21180474) | |
| 53-320, gnl|Hg17|chr6 (30335574-30335841) | |
| 53-320, gnl|Mm7|chr17 (33571220-33571487) | |
| 353-603, gnl|bosTau2|chr20 (36655627-36655873) | |
| 353-603, gnl|Hg17|chr6 (31347071-31346829) | |
| 353-603, gnl|Mm7|chr17 (32077846-32077606) | |
| 871-971, gnl|bosTau2|chr23 (23047794-23047694) | |
| 871-971, gnl|canFam2|chr12 (3938333-3938669) | |
| 871-971, gnl|dasNov1|scaffold_10933 (27709-28037) | |
| 871-971, gnl|echTel1|scaffold_220899 (9340-9001) | |
| 871-971, gnl|galGal2|chr16_random (271111-271395) | |
| 871-971, gnl|hg17|chr6 (30004005-30004367) | |
| 871-971, gnl|Hg17|chr6 (30004212-30004318) | |
| 871-971, gnl|loxAfr1|scaffold_35258 (6115-5789) | |
| 871-971, gnl|mm7|chr17 (35139276-35138931) | |
| 871-971, gnl|Mm7|chr17 (34472588-34472491) | |
| 871-971, gnl|monDom2|scaffold_42 (15844035-15844404) | |
| 871-971, gnl|oryCun1|scaffold_176700 (53005-53361) | |
| 871-971, gnl|panTro1|chr5 (30480794-30481160) | |
| 871-971, gnl|rheMac2|chr4 (30877587-30877274) | |
| 871-971, gnl|rn3|chr20 (1647265-1647597) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| clu (1.79469) | |
| cty (0.10408) |