Ss1.1-rpigca_0294.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATGAAATCCAACGGGTGACTAACATCAAAACTTCCGCCAAAATCAAATCCTTCGACTTGA TTCATTCGCCTCAAGGAGAGTTAAAGGCTGTCTTCCTGCTGCAGAACAACTTGGTGGAAT TGTACTCCCTGAACCCCTCCGTGCCAGCATCTCAGCCCGTCAGGACAAGCAGAATTACCA TCGGGGGTCACCGCAGTGATGTGCGGACTTTGTCATTCAGCTCAGACAATATCGCTGTCC TTTCAGGAGCCGCTGAGTCCATTAAGATATGGAACAGATCCACGCTACAGTGTATTCGCA CGATGACCTGCGAGTATGCACTTTGCTCCTTCTTTGTACCTGGTGATCGGCAGGTGGTCA TAGGAACAAAGACAGGAAAGCTGCAGCTTTATGACTTGGCCTCAGGAAATCTGCTGGAGA CAGTAGATGCACATGATGGAGCTTTGTGGTCCTTGTCTCTCTCTCCCGATCAGCGTGGCT TTGTGACAGGCGGTGCAGATAAATCTGTCAAGTTCTGGGATTTTGAGTTGGTAAAAGATG AAAACAGTACCCAGAAGAGGCTTTCTGTGAAGCAAACTCGAACCCTGCAACTAGATGAAG AAGTTCTGTGTGTCAGTTACTCTCCCAATCAAAAGCTGTTGGCTGTGT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATGAAATCCAACGGGTGACTAACATCAAAACTTCCGCCAAAATCAAATCCTTCGACTTGA TTCATTCGCCTCAAGGAGAGTTAAAGGCTGTCTTCCTGCTGCAGAACAACTTGGTGGAAT TGTACTCCCTGAACCCCTCCGTGCCAGCATCTCAGCCCGTCAGGACAAGCAGAATTACCA TCGGGGGTCACCGCAGTGATGTGCGGACTTTGTCATTCAGCTCAGACAATATCGCTGTCC TTTCAGGAGCCGCTGAGTCCATTAAGATATGGAACAGATCCACGCTACAGTGTATTCGCA CGATGACCTGCGAGTATGCACTTTGCTCCTTCTTTGTACCTGGTGATCGGCAGGTGGTCA TAGGAACAAAGACAGGAAAGCTGCAGCTTTATGACTTGGCCTCAGGAAATCTGCTGGAGA CAGTAGATGCACATGATGGAGCTTTGTGGTCCTTGTCTCTCTCTCCCGATCAGCGTGGCT TTGTGACAGGCGGTGCAGATAAATCTGTCAAGTTCTGGGATTTTGAGTTGGTAAAAGATG AAAACAGTACCCAGAAGAGGCTTTCTGTGAAGCAAACTCGAACCCTGCAACTAGATGAAG AAGTTCTGTGTGTCAGTTACTCTCCCAATCAAAAGCTGTTGGCTGTGT |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 44-277, gnl|bosTau2|chr3 (21290621-21290854) | |
| 44-277, gnl|Hg17|chr1 (118198058-118198291) | |
| 44-277, gnl|Mm7|chr3 (99946013-99945780) | |
| 367-473, gnl|bosTau2|chr3 (21295763-21295869) | |
| 367-473, gnl|canFam2|chr17 (58313614-58313768) | |
| 367-473, gnl|danRer3|chr9 (14369039-14369184) | |
| 367-473, gnl|dasNov1|scaffold_5035 (51498-51624) | |
| 367-473, gnl|echTel1|scaffold_315044 (35899-35771) | |
| 367-473, gnl|fr1|chrUn (78200668-78200813) | |
| 367-473, gnl|galGal2|chr1 (73136179-73136028) | |
| 367-473, gnl|hg17|chr1 (118203041-118203195) | |
| 367-473, gnl|Hg17|chr1 (118203066-118203171) | |
| 367-473, gnl|loxAfr1|scaffold_31007 (10923-11077) | |
| 367-473, gnl|mm7|chr3 (99943049-99942900) | |
| 367-473, gnl|Mm7|chr3 (99943028-99942922) | |
| 367-473, gnl|monDom2|scaffold_82 (4454512-4454658) | |
| 367-473, gnl|oryCun1|scaffold_212732 (153432-153586) | |
| 367-473, gnl|panTro1|chr1 (118045866-118046020) | |
| 367-473, gnl|rheMac2|chr1 (120905618-120905772) | |
| 367-473, gnl|rn3|chr2 (195066679-195066530) | |
| 367-473, gnl|tetNig1|chrUn_random (114825088-114825202) | |
| 367-473, gnl|xenTro1|scaffold_905 (352497-352359) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 44-277, gnl|bosTau2|chr3 (21290621-21290854) | |
| 44-277, gnl|Hg17|chr1 (118198058-118198291) | |
| 44-277, gnl|Mm7|chr3 (99946013-99945780) | |
| 367-473, gnl|bosTau2|chr3 (21295763-21295869) | |
| 367-473, gnl|canFam2|chr17 (58313614-58313768) | |
| 367-473, gnl|danRer3|chr9 (14369039-14369184) | |
| 367-473, gnl|dasNov1|scaffold_5035 (51498-51624) | |
| 367-473, gnl|echTel1|scaffold_315044 (35899-35771) | |
| 367-473, gnl|fr1|chrUn (78200668-78200813) | |
| 367-473, gnl|galGal2|chr1 (73136179-73136028) | |
| 367-473, gnl|hg17|chr1 (118203041-118203195) | |
| 367-473, gnl|Hg17|chr1 (118203066-118203171) | |
| 367-473, gnl|loxAfr1|scaffold_31007 (10923-11077) | |
| 367-473, gnl|mm7|chr3 (99943049-99942900) | |
| 367-473, gnl|Mm7|chr3 (99943028-99942922) | |
| 367-473, gnl|monDom2|scaffold_82 (4454512-4454658) | |
| 367-473, gnl|oryCun1|scaffold_212732 (153432-153586) | |
| 367-473, gnl|panTro1|chr1 (118045866-118046020) | |
| 367-473, gnl|rheMac2|chr1 (120905618-120905772) | |
| 367-473, gnl|rn3|chr2 (195066679-195066530) | |
| 367-473, gnl|tetNig1|chrUn_random (114825088-114825202) | |
| 367-473, gnl|xenTro1|scaffold_905 (352497-352359) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| mcp (0.170648) | |
| clu (0.119646) |