Non-Coding RNA Search

Ss1.1-rpigca_0985.5

Sequence:


               
               CTCCAGTGACTCTGTCAGCTGTGTTGGGGGCCAAAGCCAGCTTAACGGGGCTTCCCTGCT
CCTCCCCTAGTTTTATACCCCTTTCGATGACAGGAGAAACTTCAGAAACCAGCCCTTTCT
CAGAGCCAATGATGTAACTTTACCAGAATGTCAGGCAGGGCTGCTGCCCTGATCCACAGA
ACCCAGGAAAATGTCCCTGTCCCTTTGCTAAGGGTGGTTTTGGTGAGGCAGAGACCTCTG
CTAAGAAGGTAGTATTGTTTTTCCTTCCTCCCTCCTGTTCTTTCTTTTCGGAGCTTCTTT
AGATCAAAGACATAAGGAGTAGCTTCAGATATATCCGATACTGTGAATGTTTGACCACCT
CGGTGGCCTTCGCCCTCCTGCCCTCCTTCCCCTTTTACCTCATCAGTAGCAGTGGTTCTG
CTAAGTGCTCCCCCACCTCCCATCTCAGGAGACCAAAACTCACGGAAAAATAGGCACTTT
TGGCCAAAAGCACTGATGGCACATTTTTAGTGGTGATTTGGACAAAGAAAGTTAAATGAG
ATTTTTAAAAAGATGTTCTAGTTCCGGCAGTGTGCACTTCACATGGGGAATGGTGGGTTT
ACCTCAGTCGGATCCTGCTAGGAAGTATTTCCAGGAGACCACCCCTGGGCCGCTCCCTTT
AATCCTGGGGTGACAGGGGTGTGACTCAAAGAGGAGGTGGTTGTGGCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTCCAGTGACTCTGTCAGCTGTGTTGGGGGCCAAAGCCAGCTTAACGGGGCTTCCCTGCT
CCTCCCCTAGTTTTATACCCCTTTCGATGACAGGAGAAACTTCAGAAACCAGCCCTTTCT
CAGAGCCAATGATGTAACTTTACCAGAATGTCAGGCAGGGCTGCTGCCCTGATCCACAGA
ACCCAGGAAAATGTCCCTGTCCCTTTGCTAAGGGTGGTTTTGGTGAGGCAGAGACCTCTG
CTAAGAAGGTAGTATTGTTTTTCCTTCCTCCCTCCTGTTCTTTCTTTTCGGAGCTTCTTT
AGATCAAAGACATAAGGAGTAGCTTCAGATATATCCGATACTGTGAATGTTTGACCACCT
CGGTGGCCTTCGCCCTCCTGCCCTCCTTCCCCTTTTACCTCATCAGTAGCAGTGGTTCTG
CTAAGTGCTCCCCCACCTCCCATCTCAGGAGACCAAAACTCACGGAAAAATAGGCACTTT
TGGCCAAAAGCACTGATGGCACATTTTTAGTGGTGATTTGGACAAAGAAAGTTAAATGAG
ATTTTTAAAAAGATGTTCTAGTTCCGGCAGTGTGCACTTCACATGGGGAATGGTGGGTTT
ACCTCAGTCGGATCCTGCTAGGAAGTATTTCCAGGAGACCACCCCTGGGCCGCTCCCTTT
AATCCTGGGGTGACAGGGGTGTGACTCAAAGAGGAGGTGGTTGTGGCC

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-688, gnl|bosTau2|chr2 (77234022-77233340)
               

               
               1-688, gnl|Hg17|chr1 (29264310-29264954)
               

               
               1-688, gnl|Mm7|chr4 (131140020-131139409)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-688, gnl|bosTau2|chr2 (77234022-77233340)
               

               
               1-688, gnl|Hg17|chr1 (29264310-29264954)
               

               
               1-688, gnl|Mm7|chr4 (131140020-131139409)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               clu (0.119646)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               clu (0.119646)

	1-688, gnl\|bosTau2\|chr2 (77234022-77233340)
	1-688, gnl\|Hg17\|chr1 (29264310-29264954)
	1-688, gnl\|Mm7\|chr4 (131140020-131139409)