Non-Coding RNA Search

Ss1.1-rpigca_2113.5

Sequence:


               
               GACTAATTAGGGGACAGCCATCCATGAGCTAAGATGGTAAAGCAAGGTGCTGCATGGTCC
CAATATCTGGCTTAGTACCTGGCATGCAGTAAATGCTCAGTAAACTTTTCATCCTCTGGA
ATTCATGTCAGGTATGATAGTTCCCTCTGTGACAAGGGTGAGGAGAAGATGCAGTTATTC
CCATGGTGAGGATGTAAGGCCCATCCTTTGCTGTCCACATAGCTTTGAACATAGCCCCCG
CGGCTATTGGCAGGTGAGCATGGTCAGCATCCCTTCTTGCTGAACCACAACCTGGCTGCC
TCTGCTTCTCCTTGCTGCACAGACCTGATCAGAATGGGGGAGGTTTGGGAGTTCCTCTCT
TTGCTTAATTCACACCAGTGATAGGTTTGTGCCTTTCGAGTTCGCTGACCAAAGAATGAC
CACTCAAAAACCGTGCTGGGACTGTTTTAGAATCAACACTGGTCATAAGAAACTCTGAAA
AAAAAATCAAGCCATAAATAACTCACAAGCTGAATTTTGTGGCTTTTGTGGATCTATTTA
TTTGTATTTTTCAAAAGCAGCAAGTCTACAGCCTTAAGATACTCAAAATGACATTCTTTG
CTTCCTTTGACCACAAAAGCCACACATCTACTTCATTACCAGGAGGCTGTGTTGGGGGAG
ATTGCAACCTTCCTACTGATCTTTTAAAAAAGCAAAAAGTAAACGAGAAGCCAAGAACTG
TGTTGGTTGCAATGCATGTATTGGTTAGACTCAACTTTTTGCCAAGGATTGAAACTTTAT
CTTCAGCTTGACTTGTTAATTGGCAACTTGGCATAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GACTAATTAGGGGACAGCCATCCATGAGCTAAGATGGTAAAGCAAGGTGCTGCATGGTCC
CAATATCTGGCTTAGTACCTGGCATGCAGTAAATGCTCAGTAAACTTTTCATCCTCTGGA
ATTCATGTCAGGTATGATAGTTCCCTCTGTGACAAGGGTGAGGAGAAGATGCAGTTATTC
CCATGGTGAGGATGTAAGGCCCATCCTTTGCTGTCCACATAGCTTTGAACATAGCCCCCG
CGGCTATTGGCAGGTGAGCATGGTCAGCATCCCTTCTTGCTGAACCACAACCTGGCTGCC
TCTGCTTCTCCTTGCTGCACAGACCTGATCAGAATGGGGGAGGTTTGGGAGTTCCTCTCT
TTGCTTAATTCACACCAGTGATAGGTTTGTGCCTTTCGAGTTCGCTGACCAAAGAATGAC
CACTCAAAAACCGTGCTGGGACTGTTTTAGAATCAACACTGGTCATAAGAAACTCTGAAA
AAAAAATCAAGCCATAAATAACTCACAAGCTGAATTTTGTGGCTTTTGTGGATCTATTTA
TTTGTATTTTTCAAAAGCAGCAAGTCTACAGCCTTAAGATACTCAAAATGACATTCTTTG
CTTCCTTTGACCACAAAAGCCACACATCTACTTCATTACCAGGAGGCTGTGTTGGGGGAG
ATTGCAACCTTCCTACTGATCTTTTAAAAAAGCAAAAAGTAAACGAGAAGCCAAGAACTG
TGTTGGTTGCAATGCATGTATTGGTTAGACTCAACTTTTTGCCAAGGATTGAAACTTTAT
CTTCAGCTTGACTTGTTAATTGGCAACTTGGCATAT

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               49-816, gnl|bosTau2|chr26 (8143345-8142583)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               49-816, gnl|bosTau2|chr26 (8143345-8142583)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

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               che (0.136314)
               

               
               clu (0.119646)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               che (0.136314)
               

               
               clu (0.119646)