Non-Coding RNA Search

Ss1.1-rpigca_2237.5

Sequence:


               
               CACGGGTTTTTTCAACCACTTGAATTTAAAACCATGCTTAGCTTATGGACCATACAAAAG
CAAATGGCAGGCTAGTTTGCTAACCCCTGTGCTAGAATAGTCTTGATAAAAGCTGGTTAC
TGATATTTGAGAGACTTAAATAATGGCAATACTACACACATAAACTGAATTTTAATTCTA
CGGCTGGTATAAACTTATCATGCATCCATGACTTTGAGATAATTACCACCACTTTTTTTT
TTTTGGATTAAAGCACAGGTCATACATTTAAATATTGCTATTATATTTTAACTTTTATTC
TCACAGAGAACTGTGAAGCTAATAAGGTAAATTATTTAAATTTTGCTTCTGATTACATAG
CCACAACATTCTCATGTAGAGAATAGAAACACTACTCAATGATTGACTGCAGTGGGAGAA
ATCTCTTCTAATGTAGAAAGGGAATGTACCTTTTAAACAGGTAAATAATGGGAAATTCCA
AAAAATGCTTTTTACTCTTAAAAAAGCCACTTGGCTAAATCATGCATAGTGACATTTCTT
TTACCTTAATGCATAGATATGATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CACGGGTTTTTTCAACCACTTGAATTTAAAACCATGCTTAGCTTATGGACCATACAAAAG
CAAATGGCAGGCTAGTTTGCTAACCCCTGTGCTAGAATAGTCTTGATAAAAGCTGGTTAC
TGATATTTGAGAGACTTAAATAATGGCAATACTACACACATAAACTGAATTTTAATTCTA
CGGCTGGTATAAACTTATCATGCATCCATGACTTTGAGATAATTACCACCACTTTTTTTT
TTTTGGATTAAAGCACAGGTCATACATTTAAATATTGCTATTATATTTTAACTTTTATTC
TCACAGAGAACTGTGAAGCTAATAAGGTAAATTATTTAAATTTTGCTTCTGATTACATAG
CCACAACATTCTCATGTAGAGAATAGAAACACTACTCAATGATTGACTGCAGTGGGAGAA
ATCTCTTCTAATGTAGAAAGGGAATGTACCTTTTAAACAGGTAAATAATGGGAAATTCCA
AAAAATGCTTTTTACTCTTAAAAAAGCCACTTGGCTAAATCATGCATAGTGACATTTCTT
TTACCTTAATGCATAGATATGATA

Aligned organism(s): 1 entry(ies)

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Aligned organism(s): 1 entry(ies)

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               92-564, gnl|bosTau2|chr1 (59503427-59503908)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               92-564, gnl|bosTau2|chr1 (59503427-59503908)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               clu (0.119646)
               

               
               ldo (0.0970026)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               clu (0.119646)
               

               
               ldo (0.0970026)