Non-Coding RNA Search

Ss1.1-rpigcb_0218.5

Sequence:


               
               GAGGAAGAGGGTCCGGGCAGTGGTGCGCTTGGGACCGATCTCCGGAGACTAAGGGATAGG
TAACCTCGGCACAGCTGGAGGGACGTGCGGCTGACGGGGTCCGGGCCCCGGGCGCGGAGC
GCATCGGCCGCGGGCCCGCCCGGCTCGTGCCTTGCGGACCAGATACCCCATGTTACCCCA
TCACCAGAAGAGTCTGGGCAGAGACTGGACCACACCGTGGGAGAATCTGCAGAGGTGTTG
CTGGAACAGACATATTTCTAGTTGTATGAGGTGGCCTGGACATTATTCTCGTGCTCCTTA
CCCGTACTTCAGTAGTAGGCATTTTTCGCTAAATTGGAAACCACCTTGTTTGTTTGAGTC
TAGAACTCAGTTTCAGTCCTGGAACTGGAGACCTGACAACCTGAGCCAGACGTCTTTGAT
TCATCTCTCTAGTTACATCATGAACTCTGAGGGAGATGAGCCTTCATCAAAACGGAGAAA
ACACCAAGGCACAATAAAACGGCATTGGGAATATATGTGTAATCATAATAAAGAAAAAAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGGAAGAGGGTCCGGGCAGTGGTGCGCTTGGGACCGATCTCCGGAGACTAAGGGATAGG
TAACCTCGGCACAGCTGGAGGGACGTGCGGCTGACGGGGTCCGGGCCCCGGGCGCGGAGC
GCATCGGCCGCGGGCCCGCCCGGCTCGTGCCTTGCGGACCAGATACCCCATGTTACCCCA
TCACCAGAAGAGTCTGGGCAGAGACTGGACCACACCGTGGGAGAATCTGCAGAGGTGTTG
CTGGAACAGACATATTTCTAGTTGTATGAGGTGGCCTGGACATTATTCTCGTGCTCCTTA
CCCGTACTTCAGTAGTAGGCATTTTTCGCTAAATTGGAAACCACCTTGTTTGTTTGAGTC
TAGAACTCAGTTTCAGTCCTGGAACTGGAGACCTGACAACCTGAGCCAGACGTCTTTGAT
TCATCTCTCTAGTTACATCATGAACTCTGAGGGAGATGAGCCTTCATCAAAACGGAGAAA
ACACCAAGGCACAATAAAACGGCATTGGGAATATATGTGTAATCATAATAAAGAAAAAAC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               161-489, gnl|bosTau2|chr16 (52646163-52646491)
               

               
               161-489, gnl|Hg17|chr1 (209575157-209574829)
               

               
               161-489, gnl|Mm7|chr1 (190486371-190486699)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               161-489, gnl|bosTau2|chr16 (52646163-52646491)
               

               
               161-489, gnl|Hg17|chr1 (209575157-209574829)
               

               
               161-489, gnl|Mm7|chr1 (190486371-190486699)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               med (0.116252)
               

               
               cty (0.10408)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               med (0.116252)
               

               
               cty (0.10408)

	161-489, gnl\|bosTau2\|chr16 (52646163-52646491)
	161-489, gnl\|Hg17\|chr1 (209575157-209574829)
	161-489, gnl\|Mm7\|chr1 (190486371-190486699)