Non-Coding RNA Search

Ss1.1-rpigcb_0288.5

Sequence:


               
               CTTTTAACAATGCAACCCAAAGCGTTCTTATTTTTTAAGAATCAGGGACACATTTTTTCA
GGGTTTATGTTCAAGACAAGAAAAGGAGAATTCTCTCCTCTCTCCTATCATTTTAGCATC
CTGATCCCAGGATCCACGGGCAGATTCCTAGTCTATTGATTCAGAAATCTGGGAGATCCT
GGAAGCTCCTGGAAGCTCTTCAAGGACAGAGCTGTTAAGTAACTTGGTAACCAAGGCTGT
TGTAATCAAAGGTATTGCAGAATCATAACCCTAGCCCTCCCTTGAGTAGAAACCAACCAA
GATTGTGGAAGATTTGACTTCCAGGAGACTTTAAGCATCATCATAACACTGAAATTCATT
AGCATGCGAAATGACACACCCTCCAGCATGGTGACAGTTGACAATTGCCATGACAACAAC
CAGAAAAGCCCTTGCAAGGAGGACTGAAAAGGAGAGTTGCATCAGTTCCAGGTCCAAGCC
ACACCTCTATTCTGGTATAAGTCATGAATATTCCTCCCATTCTTTCCAATTCCTCTTTTA
CTCTGACCCTCCCCCAATACATTCGGTATTGCCAGCTGGGTTGGGAAGTTGATTTTTGAA
CTAGGTTCCAAGTTCTCCATTCTTTGGCTACTGAAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTTTAACAATGCAACCCAAAGCGTTCTTATTTTTTAAGAATCAGGGACACATTTTTTCA
GGGTTTATGTTCAAGACAAGAAAAGGAGAATTCTCTCCTCTCTCCTATCATTTTAGCATC
CTGATCCCAGGATCCACGGGCAGATTCCTAGTCTATTGATTCAGAAATCTGGGAGATCCT
GGAAGCTCCTGGAAGCTCTTCAAGGACAGAGCTGTTAAGTAACTTGGTAACCAAGGCTGT
TGTAATCAAAGGTATTGCAGAATCATAACCCTAGCCCTCCCTTGAGTAGAAACCAACCAA
GATTGTGGAAGATTTGACTTCCAGGAGACTTTAAGCATCATCATAACACTGAAATTCATT
AGCATGCGAAATGACACACCCTCCAGCATGGTGACAGTTGACAATTGCCATGACAACAAC
CAGAAAAGCCCTTGCAAGGAGGACTGAAAAGGAGAGTTGCATCAGTTCCAGGTCCAAGCC
ACACCTCTATTCTGGTATAAGTCATGAATATTCCTCCCATTCTTTCCAATTCCTCTTTTA
CTCTGACCCTCCCCCAATACATTCGGTATTGCCAGCTGGGTTGGGAAGTTGATTTTTGAA
CTAGGTTCCAAGTTCTCCATTCTTTGGCTACTGAAT

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               297-636, gnl|bosTau2|chr24 (24571217-24571551)
               


               
               299-623, gnl|bosTau2|chr21 (44736907-44737235)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               297-636, gnl|bosTau2|chr24 (24571217-24571551)
               


               
               299-623, gnl|bosTau2|chr21 (44736907-44737235)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.20816)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.20816)

	297-636, gnl\|bosTau2\|chr24 (24571217-24571551)

	299-623, gnl\|bosTau2\|chr21 (44736907-44737235)