Ss1.1-rpigcb_0326.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TCTGGCTTCACCGAGATCCTGGGAAAGCGAAATGGAGGGGTGTGTGTCTAACCTAATGGT CTGCAACCTGGCCTACAGCGGAAAGCTGGAAGAGTTGAAGGAGAGGATCCTGGCCGATAA ATCCCTTGCCACTAGGACTGACCAGGACAGCAGAACTGCATTGCATTGGGCATGCTCAGC AGGACATACAGAAATTGTTGAATTCTTGCTGCAACTTGGTGTGCCAGTGAATGATAAAGA TGATGCAGGTTGGTCTCCTCTCCATATTGCTGCTTCTGCCGGCAGGGATGAGATTGTGAA AGCCCTTCTGGGAAAAGGAGCTCAAGTCAATGCTGTCAATCAAAATGGCTGTACTCCCCT ACATTATGCAGCTTCCAAAAACAGGCATGAGATTGCGGTCATGTTACTGGAAGGCGGGGC TAATCCAGATGCCAAGGACCATTATGAGGCTACAGCAATGCACCGGGCAGCAGCCAAGGG TAACTTGAAGATGATTCATATCCTTCTGTACTACAAAGCATCCACAAACATCCAAGACAC TGAGGGTAACACTCCTCTACACTTAGCCTGTGATGAAGAGAGAGTGGAAGAAGCAAAACT GCTGGTGTCTCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TCTGGCTTCACCGAGATCCTGGGAAAGCGAAATGGAGGGGTGTGTGTCTAACCTAATGGT CTGCAACCTGGCCTACAGCGGAAAGCTGGAAGAGTTGAAGGAGAGGATCCTGGCCGATAA ATCCCTTGCCACTAGGACTGACCAGGACAGCAGAACTGCATTGCATTGGGCATGCTCAGC AGGACATACAGAAATTGTTGAATTCTTGCTGCAACTTGGTGTGCCAGTGAATGATAAAGA TGATGCAGGTTGGTCTCCTCTCCATATTGCTGCTTCTGCCGGCAGGGATGAGATTGTGAA AGCCCTTCTGGGAAAAGGAGCTCAAGTCAATGCTGTCAATCAAAATGGCTGTACTCCCCT ACATTATGCAGCTTCCAAAAACAGGCATGAGATTGCGGTCATGTTACTGGAAGGCGGGGC TAATCCAGATGCCAAGGACCATTATGAGGCTACAGCAATGCACCGGGCAGCAGCCAAGGG TAACTTGAAGATGATTCATATCCTTCTGTACTACAAAGCATCCACAAACATCCAAGACAC TGAGGGTAACACTCCTCTACACTTAGCCTGTGATGAAGAGAGAGTGGAAGAAGCAAAACT GCTGGTGTCTCA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
| 1-158, gnl|bosTau2|chrX (17561105-17560947) | |
| 1-158, gnl|canFam2|chrX (84701346-84701507) | |
| 1-158, gnl|danRer3|chr14 (27991346-27991477) | |
| 1-158, gnl|dasNov1|scaffold_3599 (98917-99079) | |
| 1-158, gnl|echTel1|scaffold_206855 (1292-1129) | |
| 1-158, gnl|fr1|chrUn (74278418-74278289) | |
| 1-158, gnl|hg17|chrX (107140759-107140919) | |
| 1-158, gnl|Hg17|chrX (107140926-107140768) | |
| 1-158, gnl|loxAfr1|scaffold_50598 (6501-6339) | |
| 1-158, gnl|mm7|chrX (135675744-135675904) | |
| 1-158, gnl|Mm7|chrX (135675911-135675753) | |
| 1-158, gnl|monDom2|scaffold_131 (2024564-2024402) | |
| 1-158, gnl|oryCun1|scaffold_192801 (95083-95249) | |
| 1-158, gnl|panTro1|chrX (110735164-110735324) | |
| 1-158, gnl|rheMac2|chrX (106808540-106808700) | |
| 1-158, gnl|rn3|chr2 (77953243-77953380) | |
| 1-158, gnl|tetNig1|chr1 (3634240-3634104) | |
| 390-558, gnl|bosTau2|chrX (17557240-17557072) | |
| 390-558, gnl|canFam2|chrX (84697166-84697346) | |
| 390-558, gnl|danRer3|chr14 (27989559-27989737) | |
| 390-558, gnl|dasNov1|scaffold_3599 (94508-94688) | |
| 390-558, gnl|echTel1|scaffold_206855 (9033-8852) | |
| 390-558, gnl|fr1|chrUn (74280079-74279899) | |
| 390-558, gnl|galGal2|chr4 (13862059-13861879) | |
| 390-558, gnl|hg17|chrX (107137056-107137236) | |
| 390-558, gnl|Hg17|chrX (107137229-107137061) | |
| 390-558, gnl|loxAfr1|scaffold_50598 (10698-10518) | |
| 390-558, gnl|mm7|chrX (135671355-135671535) | |
| 390-558, gnl|Mm7|chrX (135671528-135671360) | |
| 390-558, gnl|monDom2|scaffold_131 (2038359-2038179) | |
| 390-558, gnl|oryCun1|scaffold_192801 (90837-91017) | |
| 390-558, gnl|panTro1|chrX (110731468-110731648) | |
| 390-558, gnl|rheMac2|chrX (106804836-106805016) | |
| 390-558, gnl|rn3|chr2 (242949711-242949554) | |
| 390-558, gnl|tetNig1|chr1 (3635902-3635723) | |
| 390-558, gnl|xenTro1|scaffold_1106 (32881-33058) |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-158, gnl|bosTau2|chrX (17561105-17560947) | |
| 1-158, gnl|canFam2|chrX (84701346-84701507) | |
| 1-158, gnl|danRer3|chr14 (27991346-27991477) | |
| 1-158, gnl|dasNov1|scaffold_3599 (98917-99079) | |
| 1-158, gnl|echTel1|scaffold_206855 (1292-1129) | |
| 1-158, gnl|fr1|chrUn (74278418-74278289) | |
| 1-158, gnl|hg17|chrX (107140759-107140919) | |
| 1-158, gnl|Hg17|chrX (107140926-107140768) | |
| 1-158, gnl|loxAfr1|scaffold_50598 (6501-6339) | |
| 1-158, gnl|mm7|chrX (135675744-135675904) | |
| 1-158, gnl|Mm7|chrX (135675911-135675753) | |
| 1-158, gnl|monDom2|scaffold_131 (2024564-2024402) | |
| 1-158, gnl|oryCun1|scaffold_192801 (95083-95249) | |
| 1-158, gnl|panTro1|chrX (110735164-110735324) | |
| 1-158, gnl|rheMac2|chrX (106808540-106808700) | |
| 1-158, gnl|rn3|chr2 (77953243-77953380) | |
| 1-158, gnl|tetNig1|chr1 (3634240-3634104) | |
| 390-558, gnl|bosTau2|chrX (17557240-17557072) | |
| 390-558, gnl|canFam2|chrX (84697166-84697346) | |
| 390-558, gnl|danRer3|chr14 (27989559-27989737) | |
| 390-558, gnl|dasNov1|scaffold_3599 (94508-94688) | |
| 390-558, gnl|echTel1|scaffold_206855 (9033-8852) | |
| 390-558, gnl|fr1|chrUn (74280079-74279899) | |
| 390-558, gnl|galGal2|chr4 (13862059-13861879) | |
| 390-558, gnl|hg17|chrX (107137056-107137236) | |
| 390-558, gnl|Hg17|chrX (107137229-107137061) | |
| 390-558, gnl|loxAfr1|scaffold_50598 (10698-10518) | |
| 390-558, gnl|mm7|chrX (135671355-135671535) | |
| 390-558, gnl|Mm7|chrX (135671528-135671360) | |
| 390-558, gnl|monDom2|scaffold_131 (2038359-2038179) | |
| 390-558, gnl|oryCun1|scaffold_192801 (90837-91017) | |
| 390-558, gnl|panTro1|chrX (110731468-110731648) | |
| 390-558, gnl|rheMac2|chrX (106804836-106805016) | |
| 390-558, gnl|rn3|chr2 (242949711-242949554) | |
| 390-558, gnl|tetNig1|chr1 (3635902-3635723) | |
| 390-558, gnl|xenTro1|scaffold_1106 (32881-33058) |
| Expressed library(ies): 6 entry(ies) | More info |
| Expressed library(ies): 6 entry(ies) | Help | Less info |
| cty (0.20816) | |
| nco (0.161734) | |
| eep (0.122564) | |
| cly (0.120642) | |
| ecc (0.115035) | |
| eje (0.0988338) |
| Expressed library(ies): 6 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cty (0.20816) | |
| nco (0.161734) | |
| eep (0.122564) | |
| cly (0.120642) | |
| ecc (0.115035) | |
| eje (0.0988338) |