Non-Coding RNA Search

Ss1.1-rpigcb_11182.5

Sequence:


               
               AGAATCCAAAGCCTGAAGAGTTGAGAGAAATCATTGAGAAGACTAGAGAGATGGAGCAGA
ACAACGGCCACTACTTTGACACGGCAATTGTGAACTCAGATCTTGATAAAGCCTATCAGG
AATTGCTTAGGTTGATTAACAAACTTGATACTGAACCTCAGTGGGTACCATCCACTTGGC
TGAGGTGAAGGAAACATCCATTCTGTGGCACAGTTGGACTTGATGTGGCAAACTGCCCAT
AGGAAGATAGCCCTGACTTCAGCAAGACTCTGAGAAGATGGCAGGCAGTATAAACGGTAG
ACCTGTTCTTAGATCTTCAACTAGTGAGAAGAAAACCCCTGTAGGTGTTGTAACAGCAGT
CTTTATCTCTGTACATGGCTTTACAGATTCTCGCCTCATTTGGGGATTTTAAATGGAAGT
TTTCAGCGGAGCAGTTCCATTTTATACACATAAAAACCTTGTAATTCTGTTTTCACCTAA
CTAAATCTTTTTCGACTAGTCATATTTCCATGAAAAATTTGTGTGTATATATATACATGA
TGGTCTCACATAGTAATAAATACTCATGTTATTTAACAGTTAACTTAAAAGATTTCATGG
AAATGTGGGTGTGAAGGGAAACTGGTTCTGTGCATTAGGCAAGAGAACATCTGGTTGGTT
AAAAGACCAGTGGTCAGAAATACTTTTTTAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGAATCCAAAGCCTGAAGAGTTGAGAGAAATCATTGAGAAGACTAGAGAGATGGAGCAGA
ACAACGGCCACTACTTTGACACGGCAATTGTGAACTCAGATCTTGATAAAGCCTATCAGG
AATTGCTTAGGTTGATTAACAAACTTGATACTGAACCTCAGTGGGTACCATCCACTTGGC
TGAGGTGAAGGAAACATCCATTCTGTGGCACAGTTGGACTTGATGTGGCAAACTGCCCAT
AGGAAGATAGCCCTGACTTCAGCAAGACTCTGAGAAGATGGCAGGCAGTATAAACGGTAG
ACCTGTTCTTAGATCTTCAACTAGTGAGAAGAAAACCCCTGTAGGTGTTGTAACAGCAGT
CTTTATCTCTGTACATGGCTTTACAGATTCTCGCCTCATTTGGGGATTTTAAATGGAAGT
TTTCAGCGGAGCAGTTCCATTTTATACACATAAAAACCTTGTAATTCTGTTTTCACCTAA
CTAAATCTTTTTCGACTAGTCATATTTCCATGAAAAATTTGTGTGTATATATATACATGA
TGGTCTCACATAGTAATAAATACTCATGTTATTTAACAGTTAACTTAAAAGATTTCATGG
AAATGTGGGTGTGAAGGGAAACTGGTTCTGTGCATTAGGCAAGAGAACATCTGGTTGGTT
AAAAGACCAGTGGTCAGAAATACTTTTTTAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               10-667, gnl|bosTau2|chr10 (54294119-54293456)
               

               
               10-667, gnl|Hg17|chr14 (66869248-66869906)
               

               
               10-667, gnl|Mm7|chr12 (76796128-76796727)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               10-667, gnl|bosTau2|chr10 (54294119-54293456)
               

               
               10-667, gnl|Hg17|chr14 (66869248-66869906)
               

               
               10-667, gnl|Mm7|chr12 (76796128-76796727)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.20816)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.20816)

	10-667, gnl\|bosTau2\|chr10 (54294119-54293456)
	10-667, gnl\|Hg17\|chr14 (66869248-66869906)
	10-667, gnl\|Mm7\|chr12 (76796128-76796727)