Non-Coding RNA Search

Ss1.1-rpigcb_11513.5

Sequence:


               
               AAAAATACTTTTATTTCCAGCTTCAAGGACAAAGCTATTAGCACTAGTTTACCTGTCTTA
GATTTAATAGATGCCATTGCACCCAATGCAATTCGTCAAGAAATGATCAAAAGAGAAGAC
CTTTCTGATGAGGACAAGCTGAACAATGCTAAATATGCCATTTCAGTGGCTCGAAAGATT
GGTGCCCGGATATATGCCTTACCCGATGACCTTGTGGAAGTGAAACCAAAGATGGTTATG
ACGGTGTTTGCATGCTTAATGGGAAAAGGACTGAACAAAATAAAATAATGAAATGTTTAA
TATGATTTTCTGCCACATTAAATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAAATACTTTTATTTCCAGCTTCAAGGACAAAGCTATTAGCACTAGTTTACCTGTCTTA
GATTTAATAGATGCCATTGCACCCAATGCAATTCGTCAAGAAATGATCAAAAGAGAAGAC
CTTTCTGATGAGGACAAGCTGAACAATGCTAAATATGCCATTTCAGTGGCTCGAAAGATT
GGTGCCCGGATATATGCCTTACCCGATGACCTTGTGGAAGTGAAACCAAAGATGGTTATG
ACGGTGTTTGCATGCTTAATGGGAAAAGGACTGAACAAAATAAAATAATGAAATGTTTAA
TATGATTTTCTGCCACATTAAATA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               22-159, gnl|bosTau2|chr1 (80618089-80617952)
               

               
               22-159, gnl|Hg17|chr3 (143913035-143913172)
               

               
               22-159, gnl|Mm7|chr9 (95400620-95400483)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               22-159, gnl|bosTau2|chr1 (80618089-80617952)
               

               
               22-159, gnl|Hg17|chr3 (143913035-143913172)
               

               
               22-159, gnl|Mm7|chr9 (95400620-95400483)

Expressed library(ies): 5 entry(ies)

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Expressed library(ies): 5 entry(ies)

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               sin (0.174948)
               

               
               lin (0.145603)
               

               
               cty (0.10408)
               

               
               jej (0.0989218)
               

               
               eje (0.0988338)

Expressed library(ies): 5 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sin (0.174948)
               

               
               lin (0.145603)
               

               
               cty (0.10408)
               

               
               jej (0.0989218)
               

               
               eje (0.0988338)

	22-159, gnl\|bosTau2\|chr1 (80618089-80617952)
	22-159, gnl\|Hg17\|chr3 (143913035-143913172)
	22-159, gnl\|Mm7\|chr9 (95400620-95400483)

	sin (0.174948)
	lin (0.145603)
	cty (0.10408)
	jej (0.0989218)
	eje (0.0988338)